We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PSMB5
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:53.3TPM
GTEx:28.1RPKM
FANTOM5:121.2Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA049518

 

Bile duct cells

Not detected  

Hepatocytes

Not detected  
 
 
 

LIVER - HPA RNA-seq

Average TPM

53.3

N/A Female, age 60 Sample 1
TPM: 54.5
overview Male, age 54 Sample 2
TPM: 34
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74 Sample 3
TPM: 55.4
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62 Sample 4
TPM: 41.4
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 5
TPM: 40.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53 Sample 6
TPM: 72.7
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77 Sample 7
TPM: 58.2
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72 Sample 8
TPM: 56.7
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70 Sample 9
TPM: 52.2
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23 Sample 10
TPM: 67.6
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

28.1

GTEx sample id

Sample description

RPKM

Liver
RPKM: 28.1
Samples: 119

Max RPKM: 65.6
Min RPKM: 6.4
Std RPKM: 8.9
Median RPKM: 26.2
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 65.6
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 54.3
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 52.0
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 50.2
GTEX-P78B-1326-SM-3P611 40-49 years, female 46.8
GTEX-QEL4-1226-SM-447A4 50-59 years, male 45.7
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 45.6
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 45.0
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 43.6
GTEX-S32W-1926-SM-4AD63 50-59 years, female 43.6
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 40.8
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 40.3
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 39.9
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 38.8
GTEX-ZF29-2026-SM-4WWB7 60-69 years, female 37.8
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 37.0
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 36.6
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 36.6
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 36.0
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 35.4
GTEX-R53T-0326-SM-48FEC 50-59 years, female 35.2
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 35.0
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 34.9
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 34.7
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 34.3
GTEX-12696-0826-SM-5EGGE 60-69 years, male 34.2
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 33.7
GTEX-REY6-1226-SM-48FDR 60-69 years, male 33.2
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 33.1
GTEX-UPIC-0926-SM-4IHLV 20-29 years, female 32.8
GTEX-Q734-0326-SM-48U15 40-49 years, female 32.7
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 32.2
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 31.1
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 30.8
GTEX-QESD-2026-SM-447BI 20-29 years, male 30.5
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 30.5
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 30.0
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 29.5
GTEX-XOTO-0826-SM-4B65O 50-59 years, male 29.4
GTEX-13113-1326-SM-5GCOI 60-69 years, female 29.3
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 29.3
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 29.2
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 28.8
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 28.6
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 28.6
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 28.4
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 28.2
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 27.8
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 27.8
GTEX-S33H-1626-SM-4AD68 30-39 years, male 27.7
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 27.5
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 27.1
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 27.1
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 27.0
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 26.8
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 26.8
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 26.8
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 26.5
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 26.2
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 26.2
GTEX-X261-1726-SM-4PQYT 50-59 years, male 26.1
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 26.0
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 26.0
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 25.9
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 25.9
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 25.5
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 25.4
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 25.4
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 25.1
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 24.7
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 24.7
GTEX-1399T-0826-SM-5IFES 60-69 years, male 24.6
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 24.6
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 24.5
GTEX-RU72-1426-SM-46MUF 50-59 years, female 24.4
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 24.3
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 24.1
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 24.0
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 23.9
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 23.8
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 23.7
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 23.7
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 23.6
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 23.6
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 23.2
GTEX-YECK-1926-SM-4W21H 60-69 years, male 23.2
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 22.6
GTEX-QV44-0326-SM-4R1KD 50-59 years, male 22.2
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 22.1
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 22.0
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 21.7
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 21.7
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 21.5
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 21.4
GTEX-13112-1426-SM-5EGH8 50-59 years, male 21.2
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 21.2
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 21.1
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 20.8
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 20.8
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 20.8
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 20.7
GTEX-QEG4-1826-SM-4R1JN 30-39 years, male 20.6
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 20.1
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 20.0
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 19.7
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 19.3
GTEX-RN64-1826-SM-48FDV 50-59 years, male 18.8
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 18.8
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 18.5
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 18.3
GTEX-11ZUS-2526-SM-59872 30-39 years, male 18.2
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 17.5
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 17.4
GTEX-11GSP-0626-SM-5986T 60-69 years, female 16.8
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 16.6
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 16.5
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 15.8
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 15.3
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 6.4
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

121.2

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 121.2
FF:10018-101C9 64,69,70 years, mixed 121.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.