Fields »
ABOUT
HELP
BLOG
PNN

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:47.1TPM
GTEx:43.8RPKM
FANTOM5:52.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA001378

  

Adipocytes

 Medium  

Fibroblasts

 Medium  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA001378

  

Adipocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

47.1
N/A Female, age 80 Sample 1
TPM: 47.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 36.7
N/A Female, age 57 Sample 3
TPM: 38.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 52.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 60.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

43.8

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 42.9
Samples: 350

Max RPKM: 66.7
Min RPKM: 17.5
Std RPKM: 8.3
Median RPKM: 42.7
GTEX-13U4I-0226-SM-5SIB1 40-49 years, female 66.7
GTEX-P44H-0326-SM-2XCES 40-49 years, male 65.9
GTEX-RVPU-2326-SM-2TF6R 50-59 years, male 65.9
GTEX-11DXW-0326-SM-5H11W 40-49 years, male 64.1
GTEX-X638-0226-SM-47JZ9 70-79 years, female 63.5
GTEX-12WSA-0326-SM-5BC6I 60-69 years, male 63.0
GTEX-XOTO-0226-SM-4B66H 50-59 years, male 62.0
GTEX-YJ8O-2426-SM-5HL7S 40-49 years, female 61.3
GTEX-13N2G-2726-SM-5J1MG 60-69 years, male 60.4
GTEX-QEL4-0326-SM-3GAE5 50-59 years, male 60.1
Show all
Adipose - Visceral (Omentum)
RPKM: 45.2
Samples: 227

Max RPKM: 99.6
Min RPKM: 19.2
Std RPKM: 10.6
Median RPKM: 45.0
GTEX-14A6H-1026-SM-5SIAZ 30-39 years, male 99.6
GTEX-11DXY-0326-SM-5H12F 60-69 years, male 74.3
GTEX-131YS-1726-SM-5HL7G 60-69 years, female 69.3
GTEX-13S7M-0826-SM-5QGQX 60-69 years, female 68.4
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 65.2
GTEX-13NYS-0726-SM-5J1OR 60-69 years, male 64.6
GTEX-13PVQ-2226-SM-5L3G9 50-59 years, male 64.6
GTEX-1399T-1326-SM-5PNVH 60-69 years, male 63.2
GTEX-ZYT6-2126-SM-5GZZ4 30-39 years, male 62.8
GTEX-ZAJG-1626-SM-5HL7I 50-59 years, female 62.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

52.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 52.8
FF:10010-101C1 65,65,76 years, mixed 52.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.