Tissue expression of CDH20 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	0.8	TPM
GTEx:	0.1	RPKM
FANTOM5:	0.3	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA015490
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	0.8

Female, age 70

Sample 1
TPM: 1

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 0.5

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 1

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	0.1

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 0.1

Samples: 286

Max RPKM: 0.8
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.1

GTEX-ZQUD-0426-SM-57WFR

30-39 years, male

0.8

GTEX-11VI4-0526-SM-5EQ48

40-49 years, female

0.6

GTEX-XUZC-0426-SM-4BOPE

30-39 years, female

0.6

GTEX-WRHK-0526-SM-4MVOF

20-29 years, female

0.5

GTEX-12C56-1226-SM-5FQSU

20-29 years, male

0.4

GTEX-132QS-1426-SM-5P9GE

60-69 years, male

0.4

GTEX-OXRL-0626-SM-3NM9C

50-59 years, male

0.4

GTEX-QCQG-0626-SM-48U21

50-59 years, female

0.4

GTEX-R55C-0826-SM-48FCL

40-49 years, male

0.4

GTEX-UJMC-0926-SM-4IHLK

50-59 years, male

0.4

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	0.3

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 0.3

FF:10015-101C6

68,74,75 years, mixed

0.3