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SMALL INTESTINE - Expression summary

RNA expression
HPA:14.4TPM
GTEx:33.9RPKM
FANTOM5:30.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seq

Average TPM

14.4
overview Male, age 65 Sample 1
TPM: 6.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 12.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 22.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 16.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

33.9

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 33.9
Samples: 88

Max RPKM: 177.0
Min RPKM: 4.1
Std RPKM: 30.1
Median RPKM: 21.1
GTEX-1192X-2526-SM-59868 50-59 years, male 177.0
GTEX-117YX-0326-SM-5GICL 50-59 years, male 132.3
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 108.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 97.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 92.9
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 81.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 77.8
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 74.7
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 72.2
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 70.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

30.9

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 30.9
FF:10024-101D6 15,40,85 years, mixed 30.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.