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ABCD1

COLON - Expression summary

RNA expression
HPA:3.3TPM
GTEx:7.7RPKM
FANTOM5:27.1Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

3.3
overview Male, age 54 Sample 1
TPM: 5.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.4
Samples: 149

Max RPKM: 24.1
Min RPKM: 4.3
Std RPKM: 2.6
Median RPKM: 9.3
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 24.1
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 17.0
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 15.7
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 15.2
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 15.2
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 13.7
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 13.5
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 13.3
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 13.1
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 12.9
Show all
Colon - Transverse
RPKM: 6.4
Samples: 196

Max RPKM: 15.4
Min RPKM: 2.4
Std RPKM: 2.3
Median RPKM: 5.9
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 15.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 14.0
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 12.9
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 12.4
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 11.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 11.2
GTEX-S341-1426-SM-4AD6U 40-49 years, female 11.2
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 11.0
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 10.7
GTEX-117YX-0826-SM-5H11J 50-59 years, male 10.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

27.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 27.1
FF:10014-101C5 62,83,84 years, mixed 27.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.