Tissue expression of EMD - Staining in skin

SKIN - Expression summary

Protein expression

RNA expression

HPA:	16.8	TPM
GTEx:	42.8	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Keratinocytes:	Medium
Langerhans:	Medium
Melanocytes:	Medium

Antibody staining	Antibody HPA000609	Antibody CAB001545	Antibody CAB002029	Antibody CAB062552
Fibroblasts	Medium	Medium	Not detected	Low
Keratinocytes	Medium	Low	Medium	Medium
Langerhans	Medium	Medium	Medium	Not detected
Melanocytes	Medium	Medium	Medium	Medium

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Medium

Antibody staining	Antibody HPA000609	Antibody CAB001545	Antibody CAB002029	Antibody CAB062552
Epidermal cells	Medium	Low	High	Medium

SKIN - HPA RNA-seq

Average TPM	16.8

Female, age 34

Sample 1
TPM: 17.6

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 8.9

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 23.8

SKIN - GTEx RNA-seq

Average RPKM	42.8

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 42.7

Samples: 250

Max RPKM: 70.1
Min RPKM: 25.2
Std RPKM: 6.7
Median RPKM: 42.4

GTEX-XK95-0226-SM-4AT58

40-49 years, male

70.1

GTEX-ZAJG-1526-SM-5CVML

50-59 years, female

61.8

GTEX-11EM3-1226-SM-5N9DD

20-29 years, female

61.4

GTEX-XQ8I-0926-SM-4BOOF

50-59 years, male

60.1

GTEX-13112-0126-SM-5P9IU

50-59 years, male

59.0

GTEX-ZYW4-0626-SM-59HJR

60-69 years, male

58.2

GTEX-WHSE-0126-SM-3NMBT

20-29 years, male

57.1

GTEX-11DZ1-2426-SM-5GZZX

50-59 years, male

56.9

GTEX-XMD2-2126-SM-4YCF8

60-69 years, female

56.5

GTEX-U8XE-0226-SM-4E3J3

30-39 years, male

56.0

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Skin - Sun Exposed (Lower leg)
RPKM: 42.9

Samples: 357

Max RPKM: 67.2
Min RPKM: 25.6
Std RPKM: 6.7
Median RPKM: 42.4

GTEX-X4XY-0226-SM-4E3IZ

60-69 years, male

67.2

GTEX-P4PQ-0126-SM-2S1NM

60-69 years, male

65.3

GTEX-OXRO-0126-SM-2YUN4

60-69 years, female

64.0

GTEX-RTLS-0126-SM-447CA

60-69 years, female

63.0

GTEX-139T4-0226-SM-5HL5S

50-59 years, female

61.5

GTEX-13RTJ-2426-SM-5S2Q2

60-69 years, male

60.6

GTEX-11TT1-2526-SM-5EGIB

20-29 years, male

59.8

GTEX-139UW-2826-SM-5L3E7

60-69 years, male

58.6

GTEX-U8XE-0326-SM-3DB8P

30-39 years, male

57.9

GTEX-ZE7O-0126-SM-57WC1

50-59 years, female

57.8

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue