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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PIN4
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

PIN4

Gene description

Peptidylprolyl cis/trans isomerase, NIMA-interacting 4

Protein class

Enzymes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

5
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

General cytoplasmic and nuclear expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 1 antibody.
HPA054483
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in testis cancer (favourable), urothelial cancer (favourable) and lung cancer (favourable).
Testis cancer p<0.001
Urothelial cancer p<0.001
Lung cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA054483

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer tissues displayed weak to moderate cytoplasmic and/or nuclear positivity. Strong staining was observed in a few renal and ovarian cancers.

GENE INFORMATION

Gene name

PIN4 (HGNC Symbol)

Synonyms

EPVH, PAR14, PAR17

Description

Peptidylprolyl cis/trans isomerase, NIMA-interacting 4 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the parvulin subfamily of the peptidyl-prolyl cis/trans isomerase protein family. The encoded protein catalyzes the isomerization of peptidylprolyl bonds, and may play a role in the cell cycle, chromatin remodeling, and/or ribosome biogenesis. The encoded protein may play an additional role in the mitochondria. [provided by RefSeq, Dec 2009]

Chromosome

X

Cytoband

q13.1

Chromosome location (bp)

72181353 - 72302926

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000102309 (version 83.38)

Entrez gene

5303

UniProt

Q9Y237 (UniProt - Evidence at protein level)

neXtProt

NX_Q9Y237

Antibodypedia

PIN4 antibodies

PROTEIN BROWSER

PIN4-001
PIN4-002
PIN4-003
PIN4-005
PIN4-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PIN4-001
ENSP00000362773
ENST00000373669
Q9Y237 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
Show all
Enzymes
   ENZYME proteins
   Isomerase
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003677 [DNA binding]
GO:0003681 [bent DNA binding]
GO:0003690 [double-stranded DNA binding]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005759 [mitochondrial matrix]
GO:0005819 [spindle]
GO:0006364 [rRNA processing]
GO:0016853 [isomerase activity]
GO:0030684 [preribosome]
GO:0044822 [poly(A) RNA binding]
GO:0070062 [extracellular exosome]
Show all
156 aa
16.6 kDa
No 0
PIN4-002
ENSP00000218432
ENST00000218432
J3KMW3 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
111 aa
11.8 kDa
No 0
PIN4-003
ENSP00000402330
ENST00000446576
H0Y610 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
116 aa
12.4 kDa
No 0
PIN4-005
ENSP00000421676
ENST00000496835
H0Y8P6 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
115 aa
12.2 kDa
No 0
PIN4-201
ENSP00000409154
ENST00000423432
Q9Y237 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
Show all
Enzymes
   ENZYME proteins
   Isomerase
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003677 [DNA binding]
GO:0003681 [bent DNA binding]
GO:0003690 [double-stranded DNA binding]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005759 [mitochondrial matrix]
GO:0005819 [spindle]
GO:0006364 [rRNA processing]
GO:0030684 [preribosome]
GO:0044822 [poly(A) RNA binding]
GO:0070062 [extracellular exosome]
Show all
133 aa
14.2 kDa
No 0

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