Fields »
ABOUT
HELP
BLOG
MAPK3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:118.5TPM
GTEx:35.8RPKM
FANTOM5:78.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA003995

  

Antibody HPA005700

  

Antibody HPA030069

  

Antibody CAB002683

  

Endothelial cells

 Medium   High   Low   Medium  

Glandular cells

 Medium   High   Medium   High  

Peripheral nerve/ganglion

 Medium   Not detected   Low   Medium  
       
       
       

COLON - HPA RNA-seq

Average TPM

118.5
overview Male, age 54 Sample 1
TPM: 89.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 125.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 138.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 125.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 69.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 98.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 128
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 129.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 112.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 132.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 150
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 128.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 112.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

35.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 23.2
Samples: 149

Max RPKM: 40.0
Min RPKM: 8.4
Std RPKM: 5.7
Median RPKM: 23.1
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 40.0
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 37.7
GTEX-145LS-2926-SM-5O99G 60-69 years, female 37.2
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 36.4
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 36.3
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 35.6
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 35.0
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 34.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 33.8
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 33.4
Show all
Colon - Transverse
RPKM: 45.3
Samples: 196

Max RPKM: 91.2
Min RPKM: 13.9
Std RPKM: 17.5
Median RPKM: 46.9
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 91.2
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 84.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 80.8
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 79.4
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 77.1
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 75.1
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 74.7
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 73.9
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 73.7
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 73.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

78.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 78.8
FF:10014-101C5 62,83,84 years, mixed 78.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.