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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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USP10
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    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

USP10

Gene description

Ubiquitin specific peptidase 10

Protein class

Enzymes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

8
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Ubiquitous cytoplasmic and membranous expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 2 antibodies.
HPA006731 , HPA006749
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Testis cancer

STAINING SUMMARY

HPA006731
HPA006749

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Malignant cells showed moderate to strong cytoplasmic immunoreactivity.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most malignant cells displayed moderate to strong cytoplasmic and membranous immunoreactivity. Some renal cancers, malignant melanomas and skin cancers were weakly stained or negative.

GENE INFORMATION

Gene name

USP10 (HGNC Symbol)

Synonyms

KIAA0190, UBPO

Description

Ubiquitin specific peptidase 10 (HGNC Symbol)

Entrez gene summary

Ubiquitin is a highly conserved protein that is covalently linked to other proteins to regulate their function and degradation. This gene encodes a member of the ubiquitin-specific protease family of cysteine proteases. The enzyme specifically cleaves ubiquitin from ubiquitin-conjugated protein substrates. The protein is found in the nucleus and cytoplasm. It functions as a co-factor of the DNA-bound androgen receptor complex, and is inhibited by a protein in the Ras-GTPase pathway. The human genome contains several pseudogenes similar to this gene. Several transcript variants, some protein-coding and others not protein-coding, have been found for this gene. [provided by RefSeq, Jan 2013]

Chromosome

16

Cytoband

q24.1

Chromosome location (bp)

84699978 - 84779922

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000103194 (version 83.38)

Entrez gene

9100

UniProt

Q14694 (UniProt - Evidence at protein level)

neXtProt

NX_Q14694

Antibodypedia

USP10 antibodies

PROTEIN BROWSER

USP10-001
USP10-004
USP10-008
USP10-013
USP10-014
USP10-015
USP10-017
USP10-018

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

USP10-001
ENSP00000219473
ENST00000219473
Q14694 [Direct mapping]
Ubiquitin carboxyl-terminal hydrolase 10
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Cysteine-type peptidases
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002039 [p53 binding]
GO:0004197 [cysteine-type endopeptidase activity]
GO:0004843 [ubiquitin-specific protease activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005769 [early endosome]
GO:0006281 [DNA repair]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0006914 [autophagy]
GO:0010506 [regulation of autophagy]
GO:0016579 [protein deubiquitination]
GO:0019985 [translesion synthesis]
GO:0030330 [DNA damage response, signal transduction by p53 class mediator]
GO:0036459 [ubiquitinyl hydrolase activity]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0044325 [ion channel binding]
GO:0044822 [poly(A) RNA binding]
GO:0061136 [regulation of proteasomal protein catabolic process]
Show all
798 aa
87.1 kDa
No 0
USP10-004
ENSP00000457411
ENST00000570191
Q14694 [Direct mapping]
Ubiquitin carboxyl-terminal hydrolase 10
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Cysteine-type peptidases
Predicted intracellular proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002039 [p53 binding]
GO:0004197 [cysteine-type endopeptidase activity]
GO:0004843 [ubiquitin-specific protease activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005769 [early endosome]
GO:0006281 [DNA repair]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0006914 [autophagy]
GO:0010506 [regulation of autophagy]
GO:0016579 [protein deubiquitination]
GO:0019985 [translesion synthesis]
GO:0030330 [DNA damage response, signal transduction by p53 class mediator]
GO:0036459 [ubiquitinyl hydrolase activity]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0044325 [ion channel binding]
GO:0044822 [poly(A) RNA binding]
GO:0061136 [regulation of proteasomal protein catabolic process]
Show all
802 aa
87.5 kDa
No 0
USP10-008
ENSP00000458089
ENST00000563892
H3BVF1 [Direct mapping]
Ubiquitin carboxyl-terminal hydrolase 10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004843 [ubiquitin-specific protease activity]
GO:0005622 [intracellular]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0016579 [protein deubiquitination]
GO:0030330 [DNA damage response, signal transduction by p53 class mediator]
GO:0036459 [ubiquitinyl hydrolase activity]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0061136 [regulation of proteasomal protein catabolic process]
Show all
158 aa
17.9 kDa
No 0
USP10-013
ENSP00000455712
ENST00000562283
H3BQC6 [Direct mapping]
Ubiquitin carboxyl-terminal hydrolase 10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0061136 [regulation of proteasomal protein catabolic process]
Show all
141 aa
15.1 kDa
No 0
USP10-014
ENSP00000462762
ENST00000569038
J3KT19 [Direct mapping]
Ubiquitin carboxyl-terminal hydrolase 10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004843 [ubiquitin-specific protease activity]
GO:0005622 [intracellular]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0016579 [protein deubiquitination]
GO:0030330 [DNA damage response, signal transduction by p53 class mediator]
GO:0036459 [ubiquitinyl hydrolase activity]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0061136 [regulation of proteasomal protein catabolic process]
Show all
208 aa
23.4 kDa
No 0
USP10-015
ENSP00000454751
ENST00000570053
H3BNA1 [Direct mapping]
Ubiquitin carboxyl-terminal hydrolase 10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004843 [ubiquitin-specific protease activity]
GO:0005622 [intracellular]
GO:0016579 [protein deubiquitination]
GO:0030330 [DNA damage response, signal transduction by p53 class mediator]
GO:0036459 [ubiquitinyl hydrolase activity]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0061136 [regulation of proteasomal protein catabolic process]
Show all
150 aa
17 kDa
No 0
USP10-017
ENSP00000454987
ENST00000569925
H3BNS8 [Direct mapping]
Ubiquitin carboxyl-terminal hydrolase 10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0061136 [regulation of proteasomal protein catabolic process]
Show all
76 aa
8.3 kDa
No 0
USP10-018
ENSP00000455865
ENST00000567526
H3BQP1 [Direct mapping]
Ubiquitin carboxyl-terminal hydrolase 10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004843 [ubiquitin-specific protease activity]
GO:0005622 [intracellular]
GO:0016579 [protein deubiquitination]
GO:0030330 [DNA damage response, signal transduction by p53 class mediator]
GO:0036459 [ubiquitinyl hydrolase activity]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0061136 [regulation of proteasomal protein catabolic process]
Show all
110 aa
12.4 kDa
No 0

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