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TSC2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.5TPM
GTEx:19.5RPKM
FANTOM5:27.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA030409

  

Antibody CAB002225

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

13.5
overview Male, age 54 Sample 1
TPM: 15.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 12.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

19.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 20.1
Samples: 149

Max RPKM: 31.8
Min RPKM: 11.0
Std RPKM: 3.5
Median RPKM: 20.2
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 31.8
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 30.4
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 28.6
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 28.2
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 27.2
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 25.9
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 25.4
GTEX-145LS-2926-SM-5O99G 60-69 years, female 25.4
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 25.1
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 25.1
Show all
Colon - Transverse
RPKM: 19.1
Samples: 196

Max RPKM: 30.3
Min RPKM: 5.5
Std RPKM: 3.0
Median RPKM: 19.1
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 30.3
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 27.5
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 27.1
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 26.1
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 24.3
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 23.8
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 23.7
GTEX-PLZ6-0926-SM-3P5ZQ 30-39 years, male 23.6
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 23.5
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 23.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

27.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 27.3
FF:10014-101C5 62,83,84 years, mixed 27.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.