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DNAJA3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.8TPM
GTEx:16.7RPKM
FANTOM5:53.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA040875

  

Antibody HPA044229

  

Antibody CAB016095

  

Endothelial cells

 Medium   Not detected   Low  

Glandular cells

 High   Medium   High  

Peripheral nerve/ganglion

 Not detected   Medium  
     
     
     

COLON - HPA RNA-seq

Average TPM

10.8
overview Male, age 54 Sample 1
TPM: 10.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 11.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 14.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

16.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 14.9
Samples: 149

Max RPKM: 20.0
Min RPKM: 8.1
Std RPKM: 2.1
Median RPKM: 14.7
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 20.0
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 19.5
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 19.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 19.5
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 19.5
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 19.1
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 19.0
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 18.9
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 18.6
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 18.6
Show all
Colon - Transverse
RPKM: 18.1
Samples: 196

Max RPKM: 27.3
Min RPKM: 7.5
Std RPKM: 4.0
Median RPKM: 17.9
GTEX-1128S-1626-SM-5H12O 60-69 years, female 27.3
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 27.3
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 27.0
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 26.6
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 26.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 26.5
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 26.1
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 26.0
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 25.6
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 25.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

53.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 53.6
FF:10014-101C5 62,83,84 years, mixed 53.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.