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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:145.7TPM
GTEx:51.3RPKM
FANTOM5:114.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA048315

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

145.7
overview Male, age 54 Sample 1
TPM: 111.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 222.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 206.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 149.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 88.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 136.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 118.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 165.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 131.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 178.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 139.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 147.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 97.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

51.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 42.8
Samples: 149

Max RPKM: 72.6
Min RPKM: 17.1
Std RPKM: 10.6
Median RPKM: 41.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 72.6
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 69.7
GTEX-V955-1726-SM-4JBHF 60-69 years, male 68.4
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 67.2
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 66.1
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 65.1
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 64.1
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 62.5
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 62.3
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 61.4
Show all
Colon - Transverse
RPKM: 57.8
Samples: 196

Max RPKM: 101.4
Min RPKM: 12.8
Std RPKM: 18.5
Median RPKM: 61.1
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 101.4
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 101.2
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 98.9
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 98.5
GTEX-11DXX-1826-SM-5H126 60-69 years, female 95.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 95.3
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 92.8
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 91.6
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 89.0
GTEX-Q734-1126-SM-48TZY 40-49 years, female 85.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

114.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 114.6
FF:10014-101C5 62,83,84 years, mixed 114.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.