Expression of AAGAB in cancer - Summary - The Human Protein Atlas

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AAGAB

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TISSUE

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CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	AAGAB
Gene description	Alpha- and gamma-adaptin binding protein
Protein class	Disease related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Ubiquitous cytoplasmic expression.

ANTIBODY IHC RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Supported based on 2 antibodies. HPA039371 , HPA040174
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PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (favourable) and thyroid cancer (unfavourable).
Renal cancer p<0.001 Thyroid cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA039371	HPA040174

GENE INFORMATION
Gene name	AAGAB (HGNC Symbol)
Synonyms	FLJ11506, p34
Description	Alpha- and gamma-adaptin binding protein (HGNC Symbol)
Entrez gene summary	The protein encoded by this gene interacts with the gamma-adaptin and alpha-adaptin subunits of complexes involved in clathrin-coated vesicle trafficking. Mutations in this gene are associated with type I punctate palmoplantar keratoderma. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Dec 2012]
Chromosome	15
Cytoband	q23
Chromosome location (bp)	67201033 - 67255195
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000103591 (version 83.38)
Entrez gene	79719
UniProt	Q6PD74 (UniProt - Evidence at protein level)
neXtProt	NX_Q6PD74
Antibodypedia	AAGAB antibodies

PROTEIN BROWSER

AAGAB-001	AAGAB-002	AAGAB-003	AAGAB-005

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
AAGAB-001 ENSP00000261880 ENST00000261880	Q6PD74 [Direct mapping] Alpha- and gamma-adaptin-binding protein p34 Show all	Phobius predicted secreted proteins Predicted intracellular proteins Disease related genes Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0015031 [protein transport] Show all	315 aa 34.6 kDa	No	0
AAGAB-002 ENSP00000440735 ENST00000542650	Q6PD74 [Direct mapping] Alpha- and gamma-adaptin-binding protein p34 Show all	Predicted intracellular proteins Disease related genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0015031 [protein transport] Show all	206 aa 22.7 kDa	No	0
AAGAB-003 ENSP00000453263 ENST00000561452	Q6PD74 [Direct mapping] Alpha- and gamma-adaptin-binding protein p34 Show all	Predicted intracellular proteins Disease related genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0015031 [protein transport] Show all	206 aa 22.7 kDa	No	0
AAGAB-005 ENSP00000453059 ENST00000560362	H0YL49 [Direct mapping] Alpha- and gamma-adaptin-binding protein p34 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		58 aa 6.7 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.