Tissue expression of INTS9 - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	INTS9
Gene description	Integrator complex subunit 9
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	7
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	INTS9 (HGNC Symbol)
Synonyms	CPSF2L, FLJ10871, RC-74
Description	Integrator complex subunit 9 (HGNC Symbol)
Entrez gene summary	This gene encodes a subunit of the Integrator complex. This protein complex binds the C-terminal domain of RNA polymerase II and likely plays a role in small nuclear RNA processing. The encoded protein has similarities to the subunits of the cleavage and polyadenylation specificity factor complex. Alternatively spliced transcript variants have been described.[provided by RefSeq, Feb 2010]
Chromosome	8
Cytoband	p21.1
Chromosome location (bp)	28767661 - 28890242
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000104299 (version 83.38)
Entrez gene	55756
UniProt	Q9NV88 (UniProt - Evidence at protein level)
neXtProt	NX_Q9NV88
Antibodypedia	INTS9 antibodies

PROTEIN BROWSER

INTS9-001	INTS9-002	INTS9-004	INTS9-008	INTS9-010	INTS9-018	INTS9-020

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
INTS9-001 ENSP00000429065 ENST00000521022	Q9NV88 [Direct mapping] Integrator complex subunit 9 Show all	SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0016180 [snRNA processing] GO:0032039 [integrator complex] Show all	658 aa 73.8 kDa	No	0
INTS9-002 ENSP00000398208 ENST00000416984	Q9NV88 [Direct mapping] Integrator complex subunit 9 Show all	SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0016180 [snRNA processing] GO:0032039 [integrator complex] Show all	637 aa 71.5 kDa	No	0
INTS9-004 ENSP00000430943 ENST00000521777	Q9NV88 [Direct mapping] Integrator complex subunit 9 Show all	SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0016180 [snRNA processing] GO:0032039 [integrator complex] Show all	634 aa 71.1 kDa	No	0
INTS9-008 ENSP00000429188 ENST00000520184	E5RJ88 [Direct mapping] Integrator complex subunit 9 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0016180 [snRNA processing] GO:0032039 [integrator complex] Show all	87 aa 9.6 kDa	No	0
INTS9-010 ENSP00000427789 ENST00000523436	E5RG70 [Direct mapping] Integrator complex subunit 9 Show all	THUMBUP predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0016180 [snRNA processing] GO:0032039 [integrator complex] Show all	300 aa 33.2 kDa	No	0
INTS9-018 ENSP00000429691 ENST00000517383	H0YBK3 [Direct mapping] Integrator complex subunit 9 Show all	SCAMPI predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0016180 [snRNA processing] GO:0032039 [integrator complex] Show all	150 aa 16.7 kDa	No	0
INTS9-020 ENSP00000429539 ENST00000524081	H0YBH8 [Direct mapping] Integrator complex subunit 9 Show all	THUMBUP predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0016180 [snRNA processing] GO:0032039 [integrator complex] Show all	223 aa 24.5 kDa	No	0