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DMPK

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.9TPM
GTEx:71.5RPKM
FANTOM5:18.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA007164

  

Antibody HPA008905

  

Endothelial cells

 Low   Low  

Glandular cells

 Not detected   Medium  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

18.9
overview Male, age 54 Sample 1
TPM: 19.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 17.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 67.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 32.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 19
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

71.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 107.1
Samples: 149

Max RPKM: 291.2
Min RPKM: 25.7
Std RPKM: 57.3
Median RPKM: 96.3
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 291.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 250.2
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 249.3
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 236.6
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 234.3
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 230.0
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 227.5
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 222.1
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 215.8
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 202.7
Show all
Colon - Transverse
RPKM: 44.5
Samples: 196

Max RPKM: 237.9
Min RPKM: 5.2
Std RPKM: 37.7
Median RPKM: 33.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 237.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 159.7
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 149.2
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 146.6
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 143.7
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 135.4
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 134.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 132.9
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 121.0
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 118.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

18.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 18.6
FF:10014-101C5 62,83,84 years, mixed 18.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.