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BABAM1

GENERAL INFORMATION

Gene name

 BABAM1

Gene description

 BRISC and BRCA1 A complex member 1

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 12
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HUMAN PROTEIN ATLAS INFORMATION

RNA category
TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

 Evidence at protein level

Protein expression
normal tissue

 Cytoplasmic and nuclear expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data.

Reliability score

 Approved based on 1 antibody.
HPA068786
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY
HPA068786

GENE INFORMATION

Gene name

 BABAM1 (HGNC Symbol)

Synonyms

 C19orf62, FLJ20571, HSPC142, MERIT40, NBA1

Description

 BRISC and BRCA1 A complex member 1 (HGNC Symbol)

Entrez gene summary

Chromosome

 19

Cytoband

 p13.11

Chromosome location (bp)

 17267350 - 17281249

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000105393 (version 83.38)

Entrez gene

 29086

UniProt

 Q9NWV8 (UniProt - Evidence at protein level)

neXtProt

 NX_Q9NWV8

Antibodypedia

 BABAM1 antibodies

PROTEIN BROWSER
«
BABAM1-001
BABAM1-004
BABAM1-005
BABAM1-006
BABAM1-007
BABAM1-009
BABAM1-010
BABAM1-011
BABAM1-012
BABAM1-013
BABAM1-015
BABAM1-201
»

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
BABAM1-001
ENSP00000471605
ENST00000598188
Q9NWV8 [Direct mapping]
BRISC and BRCA1-A complex member 1
A0A024R7L2 [Target identity:100%; Query identity:100%]
HSPC142 protein, isoform CRA_a
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006303 [double-strand break repair via nonhomologous end joining]
GO:0010212 [response to ionizing radiation]
GO:0016568 [chromatin modification]
GO:0031572 [G2 DNA damage checkpoint]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070536 [protein K63-linked deubiquitination]
GO:0070552 [BRISC complex]
Show all
 329 aa
36.6 kDa 		No 0
BABAM1-004
ENSP00000470920
ENST00000601043
Q9NWV8 [Direct mapping]
BRISC and BRCA1-A complex member 1
A0A024R7L2 [Target identity:100%; Query identity:100%]
HSPC142 protein, isoform CRA_a
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006303 [double-strand break repair via nonhomologous end joining]
GO:0010212 [response to ionizing radiation]
GO:0016568 [chromatin modification]
GO:0031572 [G2 DNA damage checkpoint]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070536 [protein K63-linked deubiquitination]
GO:0070552 [BRISC complex]
Show all
 329 aa
36.6 kDa 		No 0
BABAM1-005
ENSP00000352408
ENST00000359435
Q9NWV8 [Direct mapping]
BRISC and BRCA1-A complex member 1
A0A024R7L2 [Target identity:100%; Query identity:100%]
HSPC142 protein, isoform CRA_a
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006303 [double-strand break repair via nonhomologous end joining]
GO:0010212 [response to ionizing radiation]
GO:0016568 [chromatin modification]
GO:0031572 [G2 DNA damage checkpoint]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070536 [protein K63-linked deubiquitination]
GO:0070552 [BRISC complex]
Show all
 329 aa
36.6 kDa 		No 0
BABAM1-006
ENSP00000472632
ENST00000599474
M0R2K3 [Direct mapping]
BRISC and BRCA1-A complex member 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070552 [BRISC complex]
Show all
 200 aa
21.8 kDa 		No 0
BABAM1-007
ENSP00000473182
ENST00000599057
M0R3F4 [Direct mapping]
BRISC and BRCA1-A complex member 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070552 [BRISC complex]
Show all
 181 aa
19.6 kDa 		No 0
BABAM1-009
ENSP00000472585
ENST00000601938
M0R2I2 [Direct mapping]
BRISC and BRCA1-A complex member 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070552 [BRISC complex]
Show all
 237 aa
25.7 kDa 		No 0
BABAM1-010
ENSP00000471246
ENST00000602066
M0R0I0 [Direct mapping]
BRISC and BRCA1-A complex member 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070552 [BRISC complex]
Show all
 225 aa
24.6 kDa 		No 0
BABAM1-011
ENSP00000468834
ENST00000595632
J3KQS6 [Direct mapping]
BRISC and BRCA1-A complex member 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070552 [BRISC complex]
Show all
 254 aa
28.2 kDa 		No 0
BABAM1-012
ENSP00000470088
ENST00000598567
M0QYV1 [Direct mapping]
BRISC and BRCA1-A complex member 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070552 [BRISC complex]
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 97 aa
10.5 kDa 		No 0
BABAM1-013
ENSP00000471721
ENST00000596335
M0R193 [Direct mapping]
BRISC and BRCA1-A complex member 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070552 [BRISC complex]
Show all
 218 aa
23.7 kDa 		No 0
BABAM1-015
ENSP00000472425
ENST00000601436
M0R2A4 [Direct mapping]
BRISC and BRCA1-A complex member 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070552 [BRISC complex]
Show all
 193 aa
20.9 kDa 		No 0
BABAM1-201
ENSP00000407826
ENST00000447614
J3KQS6 [Direct mapping]
BRISC and BRCA1-A complex member 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0045739 [positive regulation of DNA repair]
GO:0070531 [BRCA1-A complex]
GO:0070552 [BRISC complex]
Show all
 254 aa
28.2 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.