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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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GAPDHS
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

GAPDHS

Gene description

Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic

Protein class

Enzymes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enriched (melanoma)
HPA (cell line):Expressed in all
HPA (normal tissue):Tissue enriched (testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in spermatozoa.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Presumed off target binding observed and disregarded.

Reliability score

Approved based on 1 antibody.
HPA042666
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enriched (melanoma)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Melanoma

STAINING SUMMARY

HPA042666

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several cases of malignant melanomas exhibited moderate to strong cytoplasmic positivity. A few cases of testicular cancers and a single case of prostate cancers showed weak to moderate nuclear staining. Remaining malignant cells were negative.

GENE INFORMATION

Gene name

GAPDHS (HGNC Symbol)

Synonyms

GAPD2, GAPDH-2, GAPDS

Description

Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic (HGNC Symbol)

Entrez gene summary

This gene encodes a protein belonging to the glyceraldehyde-3-phosphate dehydrogenase family of enzymes that play an important role in carbohydrate metabolism. Like its somatic cell counterpart, this sperm-specific enzyme functions in a nicotinamide adenine dinucleotide-dependent manner to remove hydrogen and add phosphate to glyceraldehyde 3-phosphate to form 1,3-diphosphoglycerate. During spermiogenesis, this enzyme may play an important role in regulating the switch between different energy-producing pathways, and it is required for sperm motility and male fertility. [provided by RefSeq, Jul 2008]

Chromosome

19

Cytoband

q13.12

Chromosome location (bp)

35533412 - 35545316

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000105679 (version 83.38)

Entrez gene

26330

UniProt

O14556 (UniProt - Evidence at protein level)

neXtProt

NX_O14556

Antibodypedia

GAPDHS antibodies

PROTEIN BROWSER

GAPDHS-001
GAPDHS-004

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GAPDHS-001
ENSP00000222286
ENST00000222286
O14556 [Direct mapping]
Glyceraldehyde-3-phosphate dehydrogenase, testis-specific
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   Phobius predicted secreted proteins
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004365 [glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005929 [cilium]
GO:0005975 [carbohydrate metabolic process]
GO:0006006 [glucose metabolic process]
GO:0006094 [gluconeogenesis]
GO:0007286 [spermatid development]
GO:0016620 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor]
GO:0030317 [sperm motility]
GO:0031514 [motile cilium]
GO:0035686 [sperm fibrous sheath]
GO:0044281 [small molecule metabolic process]
GO:0045821 [positive regulation of glycolytic process]
GO:0050661 [NADP binding]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
GO:0061621 [canonical glycolysis]
GO:0097228 [sperm principal piece]
Show all
408 aa
44.5 kDa
No 0
GAPDHS-004
ENSP00000467255
ENST00000585510
K7EP73 [Direct mapping]
Glyceraldehyde-3-phosphate dehydrogenase, testis-specific
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016620 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor]
GO:0055114 [oxidation-reduction process]
Show all
179 aa
19.6 kDa
No 0

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