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Gene name

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Reliability

Reliability

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Method

Validation

Method

Validation

Method

Validation

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Cell line

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Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

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Antibodies

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ACTA2
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    TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

ACTA2

Gene description

Actin, alpha 2, smooth muscle, aorta

Protein class

Disease related genes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (ASC TERT1)
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Selective expression in smooth muscle, stromal and myoepithelial cells.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 4 antibodies.
HPA041264 , HPA041271 , CAB000002 , CAB013531
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA041264
HPA041271
CAB000002
CAB013531

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A majority of cancer tissues showed moderate to strong membranous and/or cytoplasmic positivity.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Colorectal, ovarian, endometrial, testicular, breast, urothelial, pancreatic and liver cancers displayed moderate to strong membranous staining. Malignant lymphomas exhibited moderate to strong cytoplasmic positivity. Remaining cancer tissues were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several malignant melanomas, lung, cervical, breast and colorectal cancers displayed weak to moderate nuclear immunoreactivity. Most skin cancers showed moderate to strong nuclear and/or cytoplasmic staining. Smooth muscle cells in tumor stroma was distinctly stained. Remaining malignant cells were negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Two cases of basal cell carcinomas in skin showed distinct cytoplasmic positivity. Remaining malignant cells were negative.

GENE INFORMATION

Gene name

ACTA2 (HGNC Symbol)

Synonyms

ACTSA

Description

Actin, alpha 2, smooth muscle, aorta (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene belongs to the actin family of proteins, which are highly conserved proteins that play a role in cell motility, structure and integrity. Alpha, beta and gamma actin isoforms have been identified, with alpha actins being a major constituent of the contractile apparatus, while beta and gamma actins are involved in the regulation of cell motility. This actin is an alpha actin that is found in skeletal muscle. Defects in this gene cause aortic aneurysm familial thoracic type 6. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Nov 2008]

Chromosome

10

Cytoband

q23.31

Chromosome location (bp)

88935074 - 88991390

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000107796 (version 83.38)

Entrez gene

59

UniProt

P62736 (UniProt - Evidence at protein level)

neXtProt

NX_P62736

Antibodypedia

ACTA2 antibodies

PROTEIN BROWSER

ACTA2-001
ACTA2-002
ACTA2-003
ACTA2-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ACTA2-001
ENSP00000224784
ENST00000224784
P62736 [Direct mapping]
Actin, aortic smooth muscle
D2JYH4 [Target identity:100%; Query identity:100%]
Actin, alpha 2, smooth muscle, aorta; Actin, alpha 2, smooth muscle, aorta, isoform CRA_a
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005524 [ATP binding]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006936 [muscle contraction]
GO:0009615 [response to virus]
GO:0010628 [positive regulation of gene expression]
GO:0019901 [protein kinase binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0043234 [protein complex]
GO:0044297 [cell body]
GO:0070062 [extracellular exosome]
GO:0072144 [glomerular mesangial cell development]
GO:0090131 [mesenchyme migration]
Show all
377 aa
42 kDa
No 0
ACTA2-002
ENSP00000396730
ENST00000415557
F6QUT6 [Direct mapping]
Actin, aortic smooth muscle
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
151 aa
16.8 kDa
No 0
ACTA2-003
ENSP00000398239
ENST00000458159
F6UVQ4 [Direct mapping]
Actin, aortic smooth muscle
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
151 aa
16.8 kDa
No 0
ACTA2-201
ENSP00000402373
ENST00000458208
P62736 [Direct mapping]
Actin, aortic smooth muscle
D2JYH4 [Target identity:100%; Query identity:100%]
Actin, alpha 2, smooth muscle, aorta; Actin, alpha 2, smooth muscle, aorta, isoform CRA_a
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006936 [muscle contraction]
GO:0008217 [regulation of blood pressure]
GO:0009615 [response to virus]
GO:0010628 [positive regulation of gene expression]
GO:0014829 [vascular smooth muscle contraction]
GO:0019901 [protein kinase binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030485 [smooth muscle contractile fiber]
GO:0043234 [protein complex]
GO:0044297 [cell body]
GO:0070062 [extracellular exosome]
GO:0072144 [glomerular mesangial cell development]
GO:0090131 [mesenchyme migration]
Show all
377 aa
42 kDa
No 0

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