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CCDC34

COLON - Expression summary

RNA expression
HPA:5.5TPM
GTEx:1.5RPKM
FANTOM5:12.9Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA037574

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

5.5
overview Male, age 54 Sample 1
TPM: 6.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 5.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.1
Samples: 149

Max RPKM: 2.7
Min RPKM: 0.1
Std RPKM: 0.4
Median RPKM: 1.0
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 2.7
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 2.4
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 2.1
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 2.1
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 2.0
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 2.0
GTEX-145LS-2926-SM-5O99G 60-69 years, female 2.0
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 2.0
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 1.9
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 1.9
Show all
Colon - Transverse
RPKM: 1.8
Samples: 196

Max RPKM: 4.6
Min RPKM: 0.3
Std RPKM: 0.9
Median RPKM: 1.7
GTEX-1128S-1626-SM-5H12O 60-69 years, female 4.6
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 4.5
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 4.4
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 4.0
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 3.9
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 3.8
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 3.8
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 3.6
GTEX-139YR-2126-SM-5KM11 50-59 years, male 3.4
GTEX-QCQG-1626-SM-48U26 50-59 years, female 3.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

12.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 12.9
FF:10014-101C5 62,83,84 years, mixed 12.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.