Fields »
ABOUT
HELP
BLOG
HSPA8

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:437.2TPM
GTEx:164.9RPKM
FANTOM5:427.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA052504

  

Antibody CAB002056

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Low   Low  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

437.2
overview Male, age 54 Sample 1
TPM: 387.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 460.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 481.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 406.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 574.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 524.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 382.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 393
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 463.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 522.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 441.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 417.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 227.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

164.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 148.3
Samples: 149

Max RPKM: 674.9
Min RPKM: 34.5
Std RPKM: 70.0
Median RPKM: 139.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 674.9
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 356.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 307.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 307.0
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 291.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 291.2
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 278.2
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 247.0
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 243.9
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 239.9
Show all
Colon - Transverse
RPKM: 177.6
Samples: 196

Max RPKM: 713.6
Min RPKM: 55.3
Std RPKM: 101.8
Median RPKM: 151.5
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 713.6
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 583.9
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 521.5
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 519.2
GTEX-Q734-1126-SM-48TZY 40-49 years, female 493.8
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 488.2
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 484.5
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 459.4
GTEX-144GN-1126-SM-5LU33 50-59 years, male 427.3
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 422.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

427.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 427.5
FF:10014-101C5 62,83,84 years, mixed 427.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.