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ANAPC15

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:42.0TPM
GTEx:5.6RPKM
FANTOM5:14.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA036596

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

42.0
overview Male, age 54 Sample 1
TPM: 42.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 37.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 44.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 36.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 24.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 58.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 48.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 38.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 37.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 56.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 52
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 39.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 30.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.2
Samples: 149

Max RPKM: 9.3
Min RPKM: 1.8
Std RPKM: 1.3
Median RPKM: 6.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 9.3
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 9.2
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 8.8
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 8.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 8.6
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 8.4
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 8.3
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 8.2
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 8.2
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 8.2
Show all
Colon - Transverse
RPKM: 5.1
Samples: 196

Max RPKM: 10.0
Min RPKM: 1.8
Std RPKM: 1.1
Median RPKM: 5.1
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 10.0
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 9.2
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 8.2
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 7.5
GTEX-QMRM-1226-SM-447C6 50-59 years, male 7.5
GTEX-117YX-0826-SM-5H11J 50-59 years, male 7.3
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 7.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 7.2
GTEX-1128S-1626-SM-5H12O 60-69 years, female 7.0
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 7.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

14.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 14.2
FF:10014-101C5 62,83,84 years, mixed 14.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.