Fields »
ABOUT
HELP
BLOG
CAMKK2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.0TPM
GTEx:10.5RPKM
FANTOM5:28.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA017389

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

20.0
overview Male, age 54 Sample 1
TPM: 27.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 17.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 18.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 20.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 18.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 22.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 16.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.1
Samples: 149

Max RPKM: 15.5
Min RPKM: 6.7
Std RPKM: 1.7
Median RPKM: 9.7
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 15.5
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 14.8
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 14.4
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 13.8
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 13.4
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 13.4
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 13.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 13.1
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 13.0
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 13.0
Show all
Colon - Transverse
RPKM: 10.8
Samples: 196

Max RPKM: 21.2
Min RPKM: 5.3
Std RPKM: 1.7
Median RPKM: 10.9
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 21.2
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 14.7
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 14.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 14.5
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 14.3
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 13.9
GTEX-R55G-1226-SM-48FDC 40-49 years, female 13.9
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 13.8
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 13.7
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 13.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

28.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 28.0
FF:10014-101C5 62,83,84 years, mixed 28.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.