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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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OAS3
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

OAS3

Gene description

2'-5'-oligoadenylate synthetase 3, 100kDa

Protein class

Enzymes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (BJ hTERT+ SV40 Large T+, BJ hTERT+ SV40 Large T+ RasG12V)
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data.

Reliability score

Uncertain based on 2 antibodies.
HPA041253 , HPA041372
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA041253
HPA041372

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A majority of cancer tissues displayed moderate cytoplasmic positivity with additional membranous staining in colorectal and endometrial cancers. Several cases of gliomas, lymphomas, liver, renal and testicular cancers were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several cases of colorectal, breast, ovarian, cervical and skin cancers as well as melanoma displayed moderate cytoplasmic and membranous positivity. Remaining cancer tissues were weakly stained or negative.

GENE INFORMATION

Gene name

OAS3

Synonyms

Description

2'-5'-oligoadenylate synthetase 3, 100kDa (HGNC Symbol)

Entrez gene summary

This gene encodes an enzyme included in the 2', 5' oligoadenylate synthase family. This enzyme is induced by interferons and catalyzes the 2', 5' oligomers of adenosine in order to bind and activate RNase L. This enzyme family plays a significant role in the inhibition of cellular protein synthesis and viral infection resistance. [provided by RefSeq, Jul 2008]

Chromosome

12

Cytoband

q24.13

Chromosome location (bp)

112938352 - 112973249

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000111331 (version 83.38)

Entrez gene

4940

UniProt

Q9Y6K5 (UniProt - Evidence at protein level)

neXtProt

NX_Q9Y6K5

Antibodypedia

OAS3 antibodies

PROTEIN BROWSER

OAS3-001
OAS3-002
OAS3-003
OAS3-006

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

OAS3-001
ENSP00000228928
ENST00000228928
Q9Y6K5 [Direct mapping]
2'-5'-oligoadenylate synthase 3
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001730 [2'-5'-oligoadenylate synthetase activity]
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005615 [extracellular space]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006139 [nucleobase-containing compound metabolic process]
GO:0006955 [immune response]
GO:0009615 [response to virus]
GO:0016740 [transferase activity]
GO:0016779 [nucleotidyltransferase activity]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045071 [negative regulation of viral genome replication]
GO:0046872 [metal ion binding]
GO:0051607 [defense response to virus]
GO:0060333 [interferon-gamma-mediated signaling pathway]
GO:0060337 [type I interferon signaling pathway]
GO:0060700 [regulation of ribonuclease activity]
Show all
1087 aa
121.2 kDa
No 0
OAS3-002
ENSP00000449299
ENST00000551007
F8VWK9 [Direct mapping]
2'-5'-oligoadenylate synthase 3
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0006955 [immune response]
GO:0008152 [metabolic process]
GO:0016740 [transferase activity]
GO:0051607 [defense response to virus]
Show all
177 aa
19.5 kDa
No 0
OAS3-003
ENSP00000448388
ENST00000548514
F8VS35 [Direct mapping]
2'-5'-oligoadenylate synthase 3
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0003725 [double-stranded RNA binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0006955 [immune response]
GO:0008152 [metabolic process]
GO:0016740 [transferase activity]
GO:0051607 [defense response to virus]
Show all
223 aa
24.6 kDa
No 0
OAS3-006
ENSP00000447323
ENST00000546973
H0YHL3 [Direct mapping]
2'-5'-oligoadenylate synthase 3
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003725 [double-stranded RNA binding]
GO:0051607 [defense response to virus]
Show all
166 aa
18.8 kDa
No 0

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