Tissue expression of MDN1 - Staining in adipose tissue - The Human Protein Atlas

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MDN1

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	3.6	TPM
GTEx:	3.7	RPKM
FANTOM5:	22.6	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Not detected

Antibody staining	Antibody HPA029666		Antibody HPA029667		Antibody HPA029668		Antibody HPA029669
Adipocytes	Not detected		Not detected		Not detected		Low
Fibroblasts	Not detected		Not detected		Not detected		Low
Peripheral nerve	Low		Not detected		Low		Low
Chondrocytes	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Not detected

Antibody staining	Antibody HPA029666		Antibody HPA029667		Antibody HPA029668		Antibody HPA029669
Adipocytes	Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Low
Peripheral nerve	Not detected		Not detected		Not detected		Low
Chondrocytes	Not detected		Not detected		Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	3.6

N/A

Female, age 80

Sample 1
TPM: 2.7

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 2.7

N/A

Female, age 57

Sample 3
TPM: 2.7

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 6.3

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 3.5

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	3.7

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 3.9

Samples: 350

Max RPKM: 11.1
Min RPKM: 1.4
Std RPKM: 0.9
Median RPKM: 3.7

GTEX-REY6-0326-SM-2TF5A

60-69 years, male

11.1

GTEX-ZVP2-1826-SM-5GU62

50-59 years, male

7.5

GTEX-OXRO-0226-SM-3LK6F

60-69 years, female

7.4

GTEX-S7SF-1826-SM-3K2AD

20-29 years, female

7.3

GTEX-QEG5-0326-SM-2S1PB

20-29 years, male

7.0

GTEX-NPJ8-0226-SM-48TBN

40-49 years, male

6.9

GTEX-148VI-1726-SM-5S2W9

60-69 years, female

6.7

GTEX-P4QT-0226-SM-3LK68

50-59 years, female

6.6

GTEX-OIZI-0226-SM-2XCEE

40-49 years, male

6.5

GTEX-14BIL-0226-SM-5SI9E

50-59 years, male

6.2

Show all

Adipose - Visceral (Omentum)
RPKM: 3.4

Samples: 227

Max RPKM: 6.4
Min RPKM: 1.3
Std RPKM: 0.8
Median RPKM: 3.3

GTEX-13PVQ-2226-SM-5L3G9

50-59 years, male

6.4

GTEX-13QBU-1326-SM-5LU4K

40-49 years, female

6.2

GTEX-XXEK-1426-SM-4BRW1

50-59 years, male

5.8

GTEX-Y114-1326-SM-4TT9A

50-59 years, female

5.8

GTEX-133LE-0926-SM-5P9J1

20-29 years, female

5.4

GTEX-ZAJG-1626-SM-5HL7I

50-59 years, female

5.3

GTEX-ZLV1-0926-SM-5S2MR

60-69 years, female

5.3

GTEX-11EM3-1126-SM-5A5KM

20-29 years, female

5.2

GTEX-12BJ1-0826-SM-5EQ5P

60-69 years, male

5.2

GTEX-13S86-0926-SM-5SI6I

40-49 years, male

5.2

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	22.6

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 22.6

65,65,76 years, mixed

22.6

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.