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Gene name

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Reliability

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Validation

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Validation

Method

Validation

Method

Validation

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Expression

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Specificity

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Specificity

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Specificity

Tissue

Detectable

Cell line

Detectable

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Detectable

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Category

Score

Score

Score

Antibodies

Column

 
 
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RPS12
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

1230.6 FPKM 961.4 FPKM

3-year survival high

28% 50%

3-year survival low

42% 31%

Log-rank P value

3.95e-2 7.18e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

1034.4

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-EB-A41B-01A 76 years, female, white, stage:iic 3466.2
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 3182.4
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 2905.9
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 2447.5
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 2426.4
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 1916.6
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 1916.5
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 1887.1
TCGA-EB-A24C-01A 56 years, male, white 1866.9
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 1730.2
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 1530.9
TCGA-FR-A726-01A 90 years, male, white, stage:iic 1512.7
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 1511.7
TCGA-ER-A42H-01A 77 years, male, white 1501.9
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 1481.9
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 1457.4
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 1451.7
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 1434.1
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 1357.2
TCGA-ER-A196-01A 64 years, female, white, stage:iic 1354.6
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 1331.5
TCGA-EB-A550-01A 75 years, female, white, stage:iic 1330.2
TCGA-YG-AA3N-01A 67 years, male, stage:iic 1308.6
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 1273.4
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 1264.8
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 1252.4
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 1241.1
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 1232.2
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 1229.0
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 1219.1
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 1165.2
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 1164.8
TCGA-EB-A299-01A 63 years, male, white, stage:iia 1163.6
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 1148.3
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 1148.1
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 1144.3
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 1111.2
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 1087.0
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 1056.0
TCGA-DA-A960-01A 73 years, male, white, stage:iib 1053.5
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 1050.2
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 1045.8
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 1042.1
TCGA-HR-A5NC-01A 90 years, female 1023.0
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 1018.0
TCGA-GN-A263-01A 24 years, male, white, stage:iv 1012.0
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 994.7
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 988.0
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 981.7
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 975.1
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 968.5
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 954.3
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 953.3
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 952.5
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 944.9
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 923.7
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 882.4
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 832.1
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 830.9
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 820.5
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 793.6
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 786.5
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 780.1
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 779.0
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 770.1
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 767.0
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 746.4
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 738.8
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 722.4
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 716.7
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 703.6
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 699.6
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 698.1
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 687.4
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 684.3
TCGA-GF-A769-01A 39 years, male, white, stage:iic 652.1
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 614.3
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 604.4
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 594.7
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 593.2
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 584.3
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 584.3
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 577.6
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 546.8
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 537.6
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 533.3
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 516.7
TCGA-EB-A431-01A 34 years, male, white, stage:iic 514.8
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 507.1
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 498.7
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 455.6
TCGA-ER-A194-01A 77 years, male, white 448.4
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 446.6
TCGA-EB-A553-01A 62 years, male, white, stage:iic 400.0
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 395.2
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 380.1
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 358.8
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 351.3
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 350.7
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 341.2
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 305.3
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 284.8
Show all

MELANOMA - Protein expression

 

Antibody HPA006124

 Antibody staining
  High
  Medium
  Low
  Not detected
  
 Intensity
  Strong
  Moderate
  Weak
  Negative
  
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
  
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
  

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