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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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WWC1
  • TISSUE

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

WWC1

Gene description

WW and C2 domain containing 1

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

6
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (RPTEC TERT1)
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data.

Reliability score

Approved based on 2 antibodies.
HPA038016 , HPA038017
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA038016
HPA038017

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer tissues displayed moderate to strong cytoplasmic immunoreactivity. Lymphomas, seminomas, squamous and basal cell carcinomas were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most of the cancer tissues showed weak to moderate cytoplasmic immunoreactivity with additional membranous staining in a few ases. Most hepatocellular carcinomas and several prostate cancers along with a few ovarian, stomach and pancreatic cancers were strongly stained. Several ymphomas and squamous cell carcinomas of skin were negative.

GENE INFORMATION

Gene name

WWC1 (HGNC Symbol)

Synonyms

KIAA0869, KIBRA, PPP1R168

Description

WW and C2 domain containing 1 (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is a cytoplasmic phosphoprotein that interacts with PRKC-zeta and dynein light chain-1. Alleles of this gene have been found that enhance memory in some individuals. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2010]

Chromosome

5

Cytoband

q34

Chromosome location (bp)

168291651 - 168472303

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000113645 (version 83.38)

Entrez gene

23286

UniProt

Q8IX03 (UniProt - Evidence at protein level)

neXtProt

NX_Q8IX03

Antibodypedia

WWC1 antibodies

PROTEIN BROWSER

WWC1-001
WWC1-002
WWC1-004
WWC1-006
WWC1-007
WWC1-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

WWC1-001
ENSP00000265293
ENST00000265293
Q8IX03 [Direct mapping]
Protein KIBRA
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription from RNA polymerase II promoter]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006351 [transcription, DNA-templated]
GO:0016477 [cell migration]
GO:0019900 [kinase binding]
GO:0030010 [establishment of cell polarity]
GO:0032386 [regulation of intracellular transport]
GO:0032587 [ruffle membrane]
GO:0032947 [protein complex scaffold]
GO:0035329 [hippo signaling]
GO:0035330 [regulation of hippo signaling]
GO:0035331 [negative regulation of hippo signaling]
GO:0043410 [positive regulation of MAPK cascade]
GO:0046621 [negative regulation of organ growth]
GO:0048471 [perinuclear region of cytoplasm]
Show all
1113 aa
125.3 kDa
No 0
WWC1-002
ENSP00000427772
ENST00000521089
Q8IX03 [Direct mapping]
Protein KIBRA
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription from RNA polymerase II promoter]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006351 [transcription, DNA-templated]
GO:0016477 [cell migration]
GO:0019900 [kinase binding]
GO:0030010 [establishment of cell polarity]
GO:0030674 [protein binding, bridging]
GO:0032386 [regulation of intracellular transport]
GO:0032587 [ruffle membrane]
GO:0032947 [protein complex scaffold]
GO:0035329 [hippo signaling]
GO:0035330 [regulation of hippo signaling]
GO:0035331 [negative regulation of hippo signaling]
GO:0043234 [protein complex]
GO:0043410 [positive regulation of MAPK cascade]
GO:0046621 [negative regulation of organ growth]
GO:0048471 [perinuclear region of cytoplasm]
Show all
1119 aa
125.9 kDa
No 0
WWC1-004
ENSP00000377473
ENST00000393895
H3BLZ3 [Direct mapping]
Protein KIBRA
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
1080 aa
121.1 kDa
No 0
WWC1-006
ENSP00000429339
ENST00000524228
H0YBE8 [Direct mapping]
Protein KIBRA
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
889 aa
99 kDa
No 0
WWC1-007
ENSP00000428084
ENST00000524038
H0YAU4 [Direct mapping]
Protein KIBRA
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
444 aa
50.6 kDa
No 0
WWC1-201
ENSP00000483898
ENST00000619752
A0A087X148 [Direct mapping]
Protein KIBRA
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
337 aa
38.6 kDa
No 0

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