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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.1TPM
GTEx:12.1RPKM
FANTOM5:25.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Low
Fibroblasts:Medium
Peripheral nerve:High
 
 
 

Antibody staining

Antibody HPA040812

  

Antibody CAB034039

  

Adipocytes

 Medium   Not detected  

Chondrocytes

 Low  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 High  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
Chondrocytes:Not available
 
 

Antibody staining

Antibody HPA040812

  

Antibody CAB034039

  

Adipocytes

 Medium   Low  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Medium  

Chondrocytes

 Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

6.1
N/A Female, age 80 Sample 1
TPM: 3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 1.8
N/A Female, age 57 Sample 3
TPM: 1.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 8.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 15.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

12.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 10.7
Samples: 350

Max RPKM: 70.3
Min RPKM: 0.8
Std RPKM: 9.8
Median RPKM: 6.9
GTEX-11DXX-2326-SM-5Q5A2 60-69 years, female 70.3
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 56.9
GTEX-XUJ4-2526-SM-4BOO4 60-69 years, female 50.5
GTEX-ZF3C-0226-SM-4WWB3 50-59 years, female 43.4
GTEX-OXRP-0226-SM-3NB14 60-69 years, female 42.9
GTEX-13PVQ-0226-SM-5SIBG 50-59 years, male 40.1
GTEX-OOBK-0226-SM-2YUMF 40-49 years, male 40.0
GTEX-11P82-1726-SM-5Q5AT 20-29 years, male 39.2
GTEX-117YX-2226-SM-5EGJJ 50-59 years, male 37.1
GTEX-ZC5H-0126-SM-4WAYL 40-49 years, female 36.9
Show all
Adipose - Visceral (Omentum)
RPKM: 14.4
Samples: 227

Max RPKM: 62.0
Min RPKM: 1.0
Std RPKM: 11.7
Median RPKM: 10.3
GTEX-VUSG-1426-SM-3GIJN 50-59 years, male 62.0
GTEX-145LV-1026-SM-5O9AE 50-59 years, male 59.6
GTEX-11P82-0326-SM-5HL51 20-29 years, male 53.4
GTEX-ZZ64-0626-SM-5GZWR 20-29 years, male 51.1
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 50.9
GTEX-WH7G-1126-SM-3NMBK 40-49 years, male 47.3
GTEX-12C56-0826-SM-5EGJ5 20-29 years, male 45.4
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 43.3
GTEX-ZA64-0926-SM-5HL7H 20-29 years, male 41.1
GTEX-ZLWG-0726-SM-5S2NG 50-59 years, female 40.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

25.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 25.4
FF:10010-101C1 65,65,76 years, mixed 25.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.