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SOFT TISSUE - Expression summary

RNA expression
HPA:11.5TPM
GTEx:5.5RPKM
FANTOM5:53.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression
 

Antibody staining

Antibody HPA042604

  

Adipocytes

 Not detected  

Chondrocytes

 Medium  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression
 

Antibody staining

Antibody HPA042604

  

Adipocytes

 Low  

Fibroblasts

 Low  

Peripheral nerve

 Not detected  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

11.5
N/A Female, age 80 Sample 1
TPM: 7.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 12.2
N/A Female, age 57 Sample 3
TPM: 11.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 12.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 13.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

5.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 5.9
Samples: 350

Max RPKM: 14.1
Min RPKM: 2.5
Std RPKM: 1.3
Median RPKM: 5.7
GTEX-S7SF-1826-SM-3K2AD 20-29 years, female 14.1
GTEX-OIZI-0226-SM-2XCEE 40-49 years, male 11.7
GTEX-P44H-0326-SM-2XCES 40-49 years, male 11.6
GTEX-REY6-0326-SM-2TF5A 60-69 years, male 10.1
GTEX-QDT8-0226-SM-32PL4 30-39 years, female 9.9
GTEX-S32W-2226-SM-2XCAY 50-59 years, female 9.9
GTEX-RM2N-1726-SM-2TF55 50-59 years, male 9.6
GTEX-RTLS-0226-SM-2TF5E 60-69 years, female 9.2
GTEX-PWCY-1926-SM-3NB25 20-29 years, female 8.9
GTEX-ZXES-2026-SM-5NQ6R 30-39 years, female 8.9
Show all
Adipose - Visceral (Omentum)
RPKM: 4.9
Samples: 227

Max RPKM: 9.5
Min RPKM: 1.2
Std RPKM: 1.0
Median RPKM: 4.9
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 9.5
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 9.0
GTEX-12WSG-0426-SM-5FQSE 50-59 years, female 7.6
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 7.1
GTEX-11ZTS-1326-SM-5EQMA 60-69 years, female 7.0
GTEX-ZDYS-2226-SM-5S2MI 50-59 years, male 7.0
GTEX-11P7K-0826-SM-5BC5F 30-39 years, male 6.9
GTEX-13N11-1826-SM-5IJDS 50-59 years, female 6.7
GTEX-Y5V5-0226-SM-5S2N8 60-69 years, female 6.7
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 6.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

53.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 53.9
FF:10010-101C1 65,65,76 years, mixed 53.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.