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ESOPHAGUS - Expression summary

RNA expression
HPA:7.1TPM
GTEx:3.2RPKM
FANTOM5:32.1Tags Per Million

ESOPHAGUS - Annotated protein expression
 

Antibody staining

Antibody HPA042604

  

Squamous epithelial cells

 Low  
 
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

7.1
overview Female, age 70 Sample 1
TPM: 5.9
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 8.2
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 7.1
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

3.2

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 3.2
Samples: 286

Max RPKM: 5.4
Min RPKM: 1.7
Std RPKM: 0.6
Median RPKM: 3.1
GTEX-11DZ1-2026-SM-5A5KG 50-59 years, male 5.4
GTEX-ZF3C-1626-SM-4WWB4 50-59 years, female 4.9
GTEX-13O3Q-0826-SM-5IFGF 50-59 years, male 4.8
GTEX-R45C-1226-SM-48FEE 60-69 years, female 4.8
GTEX-11DYG-1326-SM-5N9DO 60-69 years, male 4.7
GTEX-12KS4-0926-SM-5BC5S 30-39 years, male 4.7
GTEX-PSDG-1326-SM-48TD2 50-59 years, male 4.7
GTEX-13PVQ-1726-SM-5IFF3 50-59 years, male 4.6
GTEX-P4QS-0626-SM-3NMD1 60-69 years, male 4.6
GTEX-13OVJ-1226-SM-5L3HA 50-59 years, female 4.5
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

32.1

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 32.1
FF:10015-101C6 68,74,75 years, mixed 32.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.