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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:255.6TPM
GTEx:94.2RPKM
FANTOM5:450.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
Peripheral nerve:High
Chondrocytes:High
 

Antibody staining

Antibody HPA023981

  

Antibody CAB004210

  

Adipocytes

 High   High  

Fibroblasts

 High   High  

Peripheral nerve

 High  

Chondrocytes

 High  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
Peripheral nerve:High
 

Antibody staining

Antibody HPA023981

  

Antibody CAB004210

  

Adipocytes

 Not detected   High  

Fibroblasts

 High   High  

Peripheral nerve

 High   High  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

255.6
N/A Female, age 80 Sample 1
TPM: 198
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 151.9
N/A Female, age 57 Sample 3
TPM: 140.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 443.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 344.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

94.2

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 92.4
Samples: 350

Max RPKM: 214.3
Min RPKM: 45.9
Std RPKM: 21.0
Median RPKM: 87.6
GTEX-REY6-0326-SM-2TF5A 60-69 years, male 214.3
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 189.3
GTEX-X4XY-0326-SM-46MVZ 60-69 years, male 182.4
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 176.5
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 170.1
GTEX-QDVJ-1826-SM-2S1P3 50-59 years, male 165.0
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 161.9
GTEX-OOBK-0226-SM-2YUMF 40-49 years, male 149.3
GTEX-NPJ8-0226-SM-48TBN 40-49 years, male 143.6
GTEX-146FH-0226-SM-5QGPQ 50-59 years, female 142.1
Show all
Adipose - Visceral (Omentum)
RPKM: 96.8
Samples: 227

Max RPKM: 231.6
Min RPKM: 51.8
Std RPKM: 33.1
Median RPKM: 86.4
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 231.6
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 215.8
GTEX-ZA64-0926-SM-5HL7H 20-29 years, male 214.6
GTEX-13PVQ-2226-SM-5L3G9 50-59 years, male 204.9
GTEX-ZTSS-1026-SM-5985N 40-49 years, male 199.6
GTEX-133LE-0926-SM-5P9J1 20-29 years, female 191.2
GTEX-11EM3-1126-SM-5A5KM 20-29 years, female 183.8
GTEX-ZTX8-0726-SM-59HL9 20-29 years, male 183.3
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 175.1
GTEX-13RTK-0726-SM-5Q5EN 20-29 years, male 173.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

450.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 450.0
FF:10010-101C1 65,65,76 years, mixed 450.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.