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ACTR1B

COLON - Expression summary

RNA expression
HPA:28.7TPM
GTEx:41.1RPKM
FANTOM5:24.3Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

28.7
overview Male, age 54 Sample 1
TPM: 34.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 26.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 21.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 28.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 33.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 24.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 26
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 31.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 30.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 33.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 34.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 30.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

41.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 43.6
Samples: 149

Max RPKM: 61.5
Min RPKM: 20.3
Std RPKM: 7.1
Median RPKM: 42.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 61.5
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 60.4
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 59.4
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 59.0
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 58.3
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 58.1
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 57.5
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 55.8
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 54.6
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 54.4
Show all
Colon - Transverse
RPKM: 39.2
Samples: 196

Max RPKM: 51.5
Min RPKM: 17.0
Std RPKM: 5.3
Median RPKM: 39.5
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 51.5
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 50.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 49.9
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 49.4
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 49.3
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 49.0
GTEX-11GSP-1626-SM-5986N 60-69 years, female 48.6
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 48.2
GTEX-QLQW-0426-SM-447A7 30-39 years, male 47.8
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 47.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

24.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 24.3
FF:10014-101C5 62,83,84 years, mixed 24.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.