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ATP5F1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:40.0TPM
GTEx:55.1RPKM
FANTOM5:222.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA046067

  

Antibody HPA057347

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

40.0
overview Male, age 54 Sample 1
TPM: 13.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 82.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 130.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 56.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 30.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 32.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 23.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 42.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 34.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 32.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

55.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 37.5
Samples: 149

Max RPKM: 60.2
Min RPKM: 18.4
Std RPKM: 6.5
Median RPKM: 37.4
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 60.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 53.6
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 52.6
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 52.4
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 51.5
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 50.1
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 49.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 48.5
GTEX-XBED-1726-SM-47JYO 60-69 years, male 47.9
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 47.4
Show all
Colon - Transverse
RPKM: 68.4
Samples: 196

Max RPKM: 142.6
Min RPKM: 16.4
Std RPKM: 26.0
Median RPKM: 67.8
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 142.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 138.1
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 130.3
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 116.9
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 116.6
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 116.3
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 115.1
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 111.6
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 111.1
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 110.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

222.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 222.3
FF:10014-101C5 62,83,84 years, mixed 222.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.