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PHTF1

COLON - Expression summary

RNA expression
HPA:4.0TPM
GTEx:1.6RPKM
FANTOM5:12.6Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

4.0
overview Male, age 54 Sample 1
TPM: 4.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.8
Samples: 149

Max RPKM: 3.2
Min RPKM: 1.0
Std RPKM: 0.3
Median RPKM: 1.7
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 3.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 3.0
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 2.7
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 2.7
GTEX-12696-1926-SM-5EGJT 60-69 years, male 2.6
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 2.6
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 2.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 2.5
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 2.4
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 2.4
Show all
Colon - Transverse
RPKM: 1.5
Samples: 196

Max RPKM: 3.8
Min RPKM: 0.7
Std RPKM: 0.4
Median RPKM: 1.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 3.8
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 3.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 3.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 2.9
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 2.8
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 2.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 2.6
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 2.5
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 2.4
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 2.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

12.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 12.6
FF:10014-101C5 62,83,84 years, mixed 12.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.