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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:78.2TPM
GTEx:22.1RPKM
FANTOM5:60.2Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody HPA002868

  

Antibody CAB009822

  

Antibody CAB068233

  

Antibody CAB068234

  

Antibody CAB068235

  

Squamous epithelial cells

 High   Low   High   High   High  
         
         

ESOPHAGUS - HPA RNA-seq

Average TPM

78.2
overview Female, age 70 Sample 1
TPM: 97.6
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 75
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 62
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

22.1

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 22.1
Samples: 286

Max RPKM: 39.3
Min RPKM: 6.7
Std RPKM: 4.1
Median RPKM: 21.9
GTEX-TMMY-1126-SM-4DXSX 40-49 years, female 39.3
GTEX-13X6H-1326-SM-5LU42 50-59 years, female 33.7
GTEX-RUSQ-0826-SM-47JWW 50-59 years, male 33.2
GTEX-PSDG-1326-SM-48TD2 50-59 years, male 32.8
GTEX-ZTX8-0226-SM-5E44D 20-29 years, male 32.0
GTEX-Y5V6-1026-SM-4VBS2 60-69 years, male 31.1
GTEX-133LE-0626-SM-5IFFJ 20-29 years, female 30.7
GTEX-1399U-1026-SM-5J1OC 50-59 years, female 30.7
GTEX-144GO-2726-SM-5O9A2 60-69 years, male 30.7
GTEX-T5JW-1326-SM-4DM5G 20-29 years, female 30.0
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

60.2

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 60.2
FF:10015-101C6 68,74,75 years, mixed 60.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.