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RPS25

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:261.3TPM
GTEx:409.0RPKM
FANTOM5:1037.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA031801

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

261.3
overview Male, age 54 Sample 1
TPM: 251.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 257.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 218.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 350.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 236
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 269.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 267
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 264.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 235.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 270.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 226.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 291.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 257.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

409.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 458.7
Samples: 149

Max RPKM: 776.6
Min RPKM: 247.3
Std RPKM: 99.3
Median RPKM: 434.6
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 776.6
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 758.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 716.9
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 671.6
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 668.7
GTEX-145LS-2926-SM-5O99G 60-69 years, female 662.0
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 660.3
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 654.3
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 653.7
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 641.0
Show all
Colon - Transverse
RPKM: 371.3
Samples: 196

Max RPKM: 724.6
Min RPKM: 155.1
Std RPKM: 92.5
Median RPKM: 352.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 724.6
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 694.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 682.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 652.0
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 623.5
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 617.4
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 605.3
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 591.7
GTEX-1128S-1626-SM-5H12O 60-69 years, female 546.9
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 545.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

1037.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 1037.5
FF:10014-101C5 62,83,84 years, mixed 1037.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.