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RNF146

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:26.3TPM
GTEx:16.8RPKM
FANTOM5:46.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA027158

  

Antibody HPA027209

  

Endothelial cells

 Medium   Low  

Glandular cells

 Medium   Medium  
   
   

COLON - HPA RNA-seq

Average TPM

26.3
overview Male, age 54 Sample 1
TPM: 24.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 23.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 15
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 27.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 19.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 26.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 30.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 33
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 30
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 29.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 30.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 34.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

16.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 19.6
Samples: 149

Max RPKM: 43.7
Min RPKM: 11.4
Std RPKM: 4.1
Median RPKM: 18.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 43.7
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 34.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 31.7
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 29.0
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 28.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 27.9
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 27.5
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 27.4
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 26.9
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 25.8
Show all
Colon - Transverse
RPKM: 14.7
Samples: 196

Max RPKM: 32.4
Min RPKM: 2.9
Std RPKM: 5.1
Median RPKM: 13.2
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 32.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 30.9
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 29.8
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 29.4
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 26.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 26.5
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 26.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 25.8
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 25.7
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 25.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

46.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 46.4
FF:10014-101C5 62,83,84 years, mixed 46.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.