Tissue expression of RNF146 - Staining in skin 1

SKIN - Expression summary

Protein expression

RNA expression

HPA:	35.1	TPM
GTEx:	12.9	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Not detected
Keratinocytes:	Medium
Langerhans:	Not detected
Melanocytes:	Medium

Antibody staining	Antibody HPA027158	Antibody HPA027209
Fibroblasts	Not detected	Not detected
Keratinocytes	Low	Medium
Langerhans	Not detected	Not detected
Melanocytes	Medium	Medium

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Medium

Antibody staining	Antibody HPA027158	Antibody HPA027209
Epidermal cells	Medium	Low

SKIN - HPA RNA-seq

Average TPM	35.1

Female, age 34

Sample 1
TPM: 32.6

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 43.9

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 28.7

SKIN - GTEx RNA-seq

Average RPKM	12.9

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 12.3

Samples: 250

Max RPKM: 27.5
Min RPKM: 5.3
Std RPKM: 3.7
Median RPKM: 11.8

GTEX-WYBS-0626-SM-3NMAS

60-69 years, female

27.5

GTEX-ZVE2-2826-SM-5GU51

50-59 years, male

25.5

GTEX-145MI-0626-SM-5SI8S

60-69 years, female

22.3

GTEX-13FH7-1126-SM-5K7UG

50-59 years, female

21.8

GTEX-13N1W-2426-SM-5IJD1

70-79 years, male

21.6

GTEX-1314G-1326-SM-5BC6E

30-39 years, male

21.2

GTEX-X8HC-0626-SM-4E3HQ

50-59 years, female

21.2

GTEX-XV7Q-1826-SM-4BRUV

40-49 years, female

20.5

GTEX-12WSL-2026-SM-5GCML

50-59 years, male

20.3

GTEX-X4EP-0626-SM-3P621

60-69 years, female

20.1

Show all

Skin - Sun Exposed (Lower leg)
RPKM: 13.3

Samples: 357

Max RPKM: 36.4
Min RPKM: 4.5
Std RPKM: 4.2
Median RPKM: 13.0

GTEX-QDVN-2026-SM-3GAEP

50-59 years, male

36.4

GTEX-Y8LW-1826-SM-5S2MV

50-59 years, female

31.3

GTEX-ZAJG-0126-SM-5HL94

50-59 years, female

28.5

GTEX-13NYC-0326-SM-5K7WP

60-69 years, male

27.8

GTEX-14BIL-0126-SM-5SI92

50-59 years, male

25.7

GTEX-ZYW4-0126-SM-5E44A

60-69 years, male

23.9

GTEX-X62O-0126-SM-4E3JN

50-59 years, male

23.7

GTEX-OXRO-0126-SM-2YUN4

60-69 years, female

23.2

GTEX-OXRP-0126-SM-3NB32

60-69 years, female

23.2

GTEX-139T4-0226-SM-5HL5S

50-59 years, female

22.4

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue