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RBM25

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:21.0TPM
GTEx:28.3RPKM
FANTOM5:104.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA003025

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

21.0
overview Male, age 54 Sample 1
TPM: 22.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 22.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 18.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 15.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 18.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 19.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 26.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 24.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 19
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

28.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 28.5
Samples: 149

Max RPKM: 79.8
Min RPKM: 14.3
Std RPKM: 8.0
Median RPKM: 27.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 79.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 52.7
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 51.0
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 48.5
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 46.3
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 43.0
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 41.5
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 41.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 39.8
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 37.6
Show all
Colon - Transverse
RPKM: 28.1
Samples: 196

Max RPKM: 68.0
Min RPKM: 16.6
Std RPKM: 5.7
Median RPKM: 27.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 68.0
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 45.8
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 44.6
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 41.6
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 41.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 40.1
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 40.1
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 37.9
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 37.7
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 36.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

104.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 104.6
FF:10014-101C5 62,83,84 years, mixed 104.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.