Fields »
ABOUT
HELP
BLOG
AKAP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:65.6TPM
GTEx:43.8RPKM
FANTOM5:92.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA008691

  

Antibody CAB019286

  

Endothelial cells

 Medium   High  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

65.6
overview Male, age 54 Sample 1
TPM: 60
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 88.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 124.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 60.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 54.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 48.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 59.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 51.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 50.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 74.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 65.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 70.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 44.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

43.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 44.8
Samples: 149

Max RPKM: 96.9
Min RPKM: 5.7
Std RPKM: 18.0
Median RPKM: 42.7
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 96.9
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 94.4
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 94.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 94.3
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 93.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 91.8
GTEX-1122O-1426-SM-5H11R 60-69 years, female 86.4
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 82.3
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 78.1
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 77.5
Show all
Colon - Transverse
RPKM: 43.0
Samples: 196

Max RPKM: 79.6
Min RPKM: 5.4
Std RPKM: 11.5
Median RPKM: 44.5
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 79.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 77.6
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 75.5
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 74.5
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 74.4
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 72.3
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 60.8
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 60.6
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 60.4
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 60.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

92.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 92.2
FF:10014-101C5 62,83,84 years, mixed 92.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.