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MND1

COLON - Expression summary

RNA expression
HPA:4.6TPM
GTEx:0.4RPKM
FANTOM5:1.4Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

4.6
overview Male, age 54 Sample 1
TPM: 3.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 7.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 0.7
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.1
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 0.7
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 0.5
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 0.4
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 0.4
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 0.4
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 0.4
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 0.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 0.4
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 0.4
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 0.3
Show all
Colon - Transverse
RPKM: 0.7
Samples: 196

Max RPKM: 3.0
Min RPKM: 0.0
Std RPKM: 0.6
Median RPKM: 0.5
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 3.0
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 2.8
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 2.6
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 2.4
GTEX-144GN-1126-SM-5LU33 50-59 years, male 2.2
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 2.2
GTEX-1128S-1626-SM-5H12O 60-69 years, female 2.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 2.0
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 2.0
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 2.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

1.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 1.4
FF:10014-101C5 62,83,84 years, mixed 1.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.