Tissue expression of PDZRN3 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	17.5	TPM
GTEx:	11.6	RPKM
FANTOM5:	9.4	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Glandular cells:	Medium
Myoepithelial cells:	Medium

Antibody staining	Antibody HPA038822
Adipocytes	High
Glandular cells	Medium
Myoepithelial cells	Medium

BREAST - HPA RNA-seq

Average TPM	17.5

Female, age 52

Sample 1
TPM: 17.1

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 29.5

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 9.3

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 14.2

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	11.6

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 11.6

Samples: 214

Max RPKM: 23.2
Min RPKM: 3.2
Std RPKM: 3.7
Median RPKM: 10.8

GTEX-T5JW-2026-SM-4DM63

20-29 years, female

23.2

GTEX-YB5K-1626-SM-5IFIN

40-49 years, female

22.8

GTEX-ZEX8-2226-SM-57WC6

50-59 years, male

22.5

GTEX-ZDYS-1126-SM-5K7UB

50-59 years, male

21.7

GTEX-WYVS-1726-SM-3NMAY

40-49 years, female

19.7

GTEX-ZF2S-2026-SM-5E461

50-59 years, female

19.7

GTEX-147F4-2826-SM-5NQBN

50-59 years, male

19.2

GTEX-QMRM-1626-SM-4R1KV

50-59 years, male

19.0

GTEX-ZVT2-1826-SM-5NQ8W

50-59 years, female

19.0

GTEX-11P7K-0726-SM-5EGKX

30-39 years, male

18.8

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	9.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 9.4

FF:10080-102A8

77 years, female

9.4