Tissue expression of ZCCHC17 - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	ZCCHC17
Gene description	Zinc finger, CCHC domain containing 17
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	9
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	ZCCHC17 (HGNC Symbol)
Synonyms	HSPC251, pNO40, PS1D
Description	Zinc finger, CCHC domain containing 17 (HGNC Symbol)
Entrez gene summary
Chromosome	1
Cytoband	p35.2
Chromosome location (bp)	31296982 - 31364953
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000121766 (version 83.38)
Entrez gene	51538
UniProt	Q9NP64 (UniProt - Evidence at protein level)
neXtProt	NX_Q9NP64
Antibodypedia	ZCCHC17 antibodies

PROTEIN BROWSER

ZCCHC17-001	ZCCHC17-002	ZCCHC17-003	ZCCHC17-201	ZCCHC17-202	ZCCHC17-203	ZCCHC17-204	ZCCHC17-205	ZCCHC17-206

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ZCCHC17-001 ENSP00000343557 ENST00000344147	Q9NP64 [Direct mapping] Nucleolar protein of 40 kDa Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0002230 [positive regulation of defense response to virus by host] GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005730 [nucleolus] GO:0008270 [zinc ion binding] GO:0030529 [ribonucleoprotein complex] GO:0043231 [intracellular membrane-bounded organelle] GO:0044822 [poly(A) RNA binding] GO:0045111 [intermediate filament cytoskeleton] GO:0098779 [mitophagy in response to mitochondrial depolarization] Show all	241 aa 27.6 kDa	No	0
ZCCHC17-002 ENSP00000362819 ENST00000373714	Q9NP64 [Direct mapping] Nucleolar protein of 40 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0002230 [positive regulation of defense response to virus by host] GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005730 [nucleolus] GO:0008270 [zinc ion binding] GO:0030529 [ribonucleoprotein complex] GO:0043231 [intracellular membrane-bounded organelle] GO:0044822 [poly(A) RNA binding] GO:0045111 [intermediate filament cytoskeleton] GO:0098779 [mitophagy in response to mitochondrial depolarization] Show all	241 aa 27.6 kDa	No	0
ZCCHC17-003 ENSP00000486079 ENST00000627541	A0A0D9SEW3 [Direct mapping] Nucleolar protein of 40 kDa Show all	SCAMPI predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] Show all	243 aa 28 kDa	No	0
ZCCHC17-201 ENSP00000391336 ENST00000422613	E7EPF0 [Direct mapping] Nucleolar protein of 40 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0008270 [zinc ion binding] Show all	212 aa 24.2 kDa	No	0
ZCCHC17-202 ENSP00000444742 ENST00000546109	Q9NP64 [Direct mapping] Nucleolar protein of 40 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0002230 [positive regulation of defense response to virus by host] GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005730 [nucleolus] GO:0008270 [zinc ion binding] GO:0030529 [ribonucleoprotein complex] GO:0043231 [intracellular membrane-bounded organelle] GO:0044822 [poly(A) RNA binding] GO:0045111 [intermediate filament cytoskeleton] GO:0098779 [mitophagy in response to mitochondrial depolarization] Show all	233 aa 26.8 kDa	No	0
ZCCHC17-203 ENSP00000480986 ENST00000615916	A0A087WXF8 [Direct mapping] Nucleolar protein of 40 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005730 [nucleolus] GO:0008270 [zinc ion binding] GO:0022625 [cytosolic large ribosomal subunit] Show all	263 aa 29.6 kDa	No	0
ZCCHC17-204 ENSP00000482122 ENST00000616393	A0A087WYV3 [Direct mapping] Nucleolar protein of 40 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0008270 [zinc ion binding] Show all	179 aa 20.5 kDa	No	0
ZCCHC17-205 ENSP00000481743 ENST00000616859	A0A087WYF0 [Direct mapping] Nucleolar protein of 40 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] Show all	160 aa 18.3 kDa	No	0
ZCCHC17-206 ENSP00000481299 ENST00000618216	A0A087WXU5 [Direct mapping] Nucleolar protein of 40 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] Show all	146 aa 16.5 kDa	No	0