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TUBA1B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:606.5TPM
GTEx:209.8RPKM
FANTOM5:777.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA039247

  

Antibody HPA043684

  

Antibody HPA063394

  

Antibody CAB011513

  

Endothelial cells

 High   Low   Medium   Medium  

Glandular cells

 High   Medium   Medium   Low  

Peripheral nerve/ganglion

 High   Medium   Medium   Low  
       
       
       

COLON - HPA RNA-seq

Average TPM

606.5
overview Male, age 54 Sample 1
TPM: 506.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 428.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 489.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 349.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 381
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 996.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1170.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 501.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 611.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 769.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 725.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 541.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 413
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

209.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 210.2
Samples: 149

Max RPKM: 608.0
Min RPKM: 89.1
Std RPKM: 70.7
Median RPKM: 194.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 608.0
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 382.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 378.0
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 360.4
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 358.5
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 346.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 345.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 344.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 340.1
GTEX-XBED-1726-SM-47JYO 60-69 years, male 330.8
Show all
Colon - Transverse
RPKM: 209.5
Samples: 196

Max RPKM: 591.2
Min RPKM: 76.5
Std RPKM: 84.1
Median RPKM: 191.3
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 591.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 567.1
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 504.7
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 442.3
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 436.5
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 413.9
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 389.3
GTEX-QMRM-1226-SM-447C6 50-59 years, male 381.1
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 379.3
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 378.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

777.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 777.7
FF:10014-101C5 62,83,84 years, mixed 777.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.