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OBSL1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.7TPM
GTEx:11.4RPKM
FANTOM5:16.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA036404

  

Antibody HPA036405

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

7.7
overview Male, age 54 Sample 1
TPM: 9.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 10.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 6.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 15.1
Samples: 149

Max RPKM: 24.0
Min RPKM: 3.6
Std RPKM: 3.4
Median RPKM: 14.9
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 24.0
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 22.7
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 22.2
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 21.8
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 21.5
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 21.4
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 21.0
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 21.0
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 20.8
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 20.8
Show all
Colon - Transverse
RPKM: 8.6
Samples: 196

Max RPKM: 29.6
Min RPKM: 0.4
Std RPKM: 5.7
Median RPKM: 6.8
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 29.6
GTEX-S341-1426-SM-4AD6U 40-49 years, female 26.2
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 24.8
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 24.6
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 22.5
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 20.8
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 20.2
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 19.5
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 19.4
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 19.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

16.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 16.4
FF:10014-101C5 62,83,84 years, mixed 16.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.