Expression of GCNT7 in cancer - Summary - The Human Protein Atlas

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GCNT7

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	GCNT7
Gene description	Glucosaminyl (N-acetyl) transferase family member 7
Protein class	Predicted intracellular proteins Predicted secreted proteins
Predicted localization	Intracellular,Secreted
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Not detected
HPA (normal tissue):	Tissue enriched (bone marrow)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA052617
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA052617

GENE INFORMATION
Gene name	GCNT7 (HGNC Symbol)
Synonyms	C20orf105, dJ1153D9.2
Description	Glucosaminyl (N-acetyl) transferase family member 7 (HGNC Symbol)
Entrez gene summary
Chromosome	20
Cytoband	q13.31
Chromosome location (bp)	56491492 - 56525925
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000124091 (version 83.38)
Entrez gene	140687
UniProt	Q6ZNI0 (UniProt - Evidence at transcript level)
neXtProt	NX_Q6ZNI0
Antibodypedia	GCNT7 antibodies

PROTEIN BROWSER

GCNT7-001	GCNT7-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
GCNT7-001 ENSP00000243913 ENST00000243913	Q6ZNI0 [Direct mapping] Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7 Show all	Predicted intracellular proteins Show all	GO:0000139 [Golgi membrane] GO:0006486 [protein glycosylation] GO:0008375 [acetylglucosaminyltransferase activity] GO:0016020 [membrane] GO:0016021 [integral component of membrane] Show all	308 aa 35.8 kDa	No	0
GCNT7-201 ENSP00000482600 ENST00000617620	A0A087WZE6 [Direct mapping] Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7 Show all	MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins THUMBUP predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0008152 [metabolic process] GO:0008375 [acetylglucosaminyltransferase activity] GO:0016020 [membrane] Show all	429 aa 49.2 kDa	Yes	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.