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MAD2L1BP

COLON - Expression summary

RNA expression
HPA:25.4TPM
GTEx:9.1RPKM
FANTOM5:21.6Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

25.4
overview Male, age 54 Sample 1
TPM: 23.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 26.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 33.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 33
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 23.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 34.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 30
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 30.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 21.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.2
Samples: 149

Max RPKM: 10.7
Min RPKM: 3.2
Std RPKM: 1.5
Median RPKM: 6.2
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 10.7
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 10.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 9.3
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 9.2
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 9.1
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 9.0
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 8.8
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 8.7
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 8.7
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 8.6
Show all
Colon - Transverse
RPKM: 11.2
Samples: 196

Max RPKM: 25.2
Min RPKM: 3.4
Std RPKM: 3.9
Median RPKM: 11.8
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 25.2
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 19.7
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 19.5
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 19.2
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 17.8
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 17.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 17.6
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 17.6
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 17.5
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 17.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

21.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 21.6
FF:10014-101C5 62,83,84 years, mixed 21.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.