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SLC2A4RG

COLON - Expression summary

RNA expression
HPA:10.2TPM
GTEx:31.8RPKM
FANTOM5:27.0Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

10.2
overview Male, age 54 Sample 1
TPM: 21.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 9.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

31.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 40.7
Samples: 149

Max RPKM: 86.9
Min RPKM: 17.0
Std RPKM: 12.1
Median RPKM: 40.4
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 86.9
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 80.0
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 77.4
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 65.2
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 64.4
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 64.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 62.0
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 61.0
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 60.4
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 59.9
Show all
Colon - Transverse
RPKM: 25.0
Samples: 196

Max RPKM: 54.7
Min RPKM: 10.2
Std RPKM: 10.2
Median RPKM: 23.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 54.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 50.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 48.7
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 47.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 47.7
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 46.8
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 46.4
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 46.4
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 46.0
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 46.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

27.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 27.0
FF:10014-101C5 62,83,84 years, mixed 27.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.