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WDR60

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:8.2TPM
GTEx:10.1RPKM
FANTOM5:38.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA020607

  

Antibody HPA021316

  

Endothelial cells

 Medium   Low  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

8.2
overview Male, age 54 Sample 1
TPM: 11.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 12.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 11.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 12.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 6.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 11.9
Samples: 149

Max RPKM: 17.7
Min RPKM: 5.4
Std RPKM: 2.1
Median RPKM: 11.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 17.7
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 17.0
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 16.9
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 16.5
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 16.4
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 15.7
GTEX-12696-1926-SM-5EGJT 60-69 years, male 15.6
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 15.3
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 15.2
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 15.1
Show all
Colon - Transverse
RPKM: 8.7
Samples: 196

Max RPKM: 17.1
Min RPKM: 3.3
Std RPKM: 2.5
Median RPKM: 8.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 17.1
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 16.4
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 16.1
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 15.3
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 15.1
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 14.3
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 13.9
GTEX-Y114-1526-SM-4TT79 50-59 years, female 13.4
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 13.3
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 13.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

38.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 38.0
FF:10014-101C5 62,83,84 years, mixed 38.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.