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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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ABHD8
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

ABHD8

Gene description

Abhydrolase domain containing 8

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

3
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (PC-3)
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

cytoplasmic and membranous expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Approved based on 1 antibody.
HPA037658
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PROGNOSTIC SUMMARY

Prognostic marker in pancreatic cancer (favourable) and colorectal cancer (unfavourable).
Pancreatic cancer p<0.001
Colorectal cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA037658

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cases of colorectal, pancreas and breast cancers as well as several cases of malignant melanomas, lung, prostate, skin, liver and gastric cancers showed moderate to strong cytoplasmic and membranous staining. Nuclear or nucleolar positivity was observed in a few cases. Remaining malignant tissues were in general weakly stained or negative.

GENE INFORMATION

Gene name

ABHD8 (HGNC Symbol)

Synonyms

FLJ11743, MGC14280, MGC2512

Description

Abhydrolase domain containing 8 (HGNC Symbol)

Entrez gene summary

This gene is upstream of, and in a head-to-head orientation with the gene for the mitochondrial ribosomal protein L34. The predicted protein contains alpha/beta hydrolase fold and secretory lipase domains. [provided by RefSeq, Jul 2008]

Chromosome

19

Cytoband

p13.11

Chromosome location (bp)

17292131 - 17310236

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000127220 (version 83.38)

Entrez gene

79575

UniProt

Q96I13 (UniProt - Evidence at transcript level)

neXtProt

NX_Q96I13

Antibodypedia

ABHD8 antibodies

PROTEIN BROWSER

ABHD8-001
ABHD8-003
ABHD8-004

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ABHD8-001
ENSP00000247706
ENST00000247706
Q96I13 [Direct mapping]
Abhydrolase domain-containing protein 8
B2C6G3 [Target identity:100%; Query identity:100%]
Abhydrolase domain containing 8
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   THUMBUP predicted membrane proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016787 [hydrolase activity]
GO:0070062 [extracellular exosome]
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439 aa
47.3 kDa
No 0
ABHD8-003
ENSP00000468883
ENST00000593489
M0QX40 [Direct mapping]
Abhydrolase domain-containing protein 8
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Predicted intracellular proteins
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175 aa
18 kDa
No 0
ABHD8-004
ENSP00000470413
ENST00000594194
M0QZA8 [Direct mapping]
Abhydrolase domain-containing protein 8
Show all
Predicted intracellular proteins
Show all
130 aa
13.7 kDa
No 0

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