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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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RAC2
  • TISSUE

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  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

RAC2

Gene description

Ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)

Protein class

Disease related genes
Predicted intracellular proteins
RAS pathway related proteins

Predicted localization

Intracellular

Number of transcripts

5
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (HL-60, HMC-1, U-87 MG)
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in several tissues, most abundant in immune cells.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Antibody staining in cells/structures not annotated, view images.

Reliability score

Approved based on 2 antibodies.
HPA047820 , CAB022946
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable) and breast cancer (favourable).
Renal cancer p<0.001
Breast cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA047820
CAB022946

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several cases of urothelial cancers, squamous and basal cell carcinomas along with a few cases of non-Hodgkins lymphomas and ovarian cancers showed moderate to strong cytoplasmic positivity. Remaining cancers were negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer tissues were negative. Lymphoma showed cases of weak staining.

GENE INFORMATION

Gene name

RAC2 (HGNC Symbol)

Synonyms

EN-7

Description

Ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the Ras superfamily of small guanosine triphosphate (GTP)-metabolizing proteins. The encoded protein localizes to the plasma membrane, where it regulates diverse processes, such as secretion, phagocytosis, and cell polarization. Activity of this protein is also involved in the generation of reactive oxygen species. Mutations in this gene are associated with neutrophil immunodeficiency syndrome. There is a pseudogene for this gene on chromosome 6. [provided by RefSeq, Jul 2013]

Chromosome

22

Cytoband

q13.1

Chromosome location (bp)

37225261 - 37244448

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000128340 (version 83.38)

Entrez gene

5880

UniProt

P15153 (UniProt - Evidence at protein level)

neXtProt

NX_P15153

Antibodypedia

RAC2 antibodies

PROTEIN BROWSER

RAC2-001
RAC2-002
RAC2-003
RAC2-004
RAC2-007

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

RAC2-001
ENSP00000249071
ENST00000249071
P15153 [Direct mapping]
Ras-related C3 botulinum toxin substrate 2
A0A024R1P2 [Target identity:100%; Query identity:100%]
Ras-related C3 botulinum toxin substrate 2 (Rho family, small GTP binding protein Rac2), isoform CRA_a
Show all
Predicted intracellular proteins
RAS pathway related proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003924 [GTPase activity]
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0005635 [nuclear envelope]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005884 [actin filament]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006886 [intracellular protein transport]
GO:0006913 [nucleocytoplasmic transport]
GO:0006935 [chemotaxis]
GO:0007015 [actin filament organization]
GO:0007165 [signal transduction]
GO:0007186 [G-protein coupled receptor signaling pathway]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007411 [axon guidance]
GO:0007596 [blood coagulation]
GO:0008284 [positive regulation of cell proliferation]
GO:0010310 [regulation of hydrogen peroxide metabolic process]
GO:0010592 [positive regulation of lamellipodium assembly]
GO:0010810 [regulation of cell-substrate adhesion]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019887 [protein kinase regulator activity]
GO:0030027 [lamellipodium]
GO:0030031 [cell projection assembly]
GO:0030036 [actin cytoskeleton organization]
GO:0030168 [platelet activation]
GO:0030670 [phagocytic vesicle membrane]
GO:0042129 [regulation of T cell proliferation]
GO:0043304 [regulation of mast cell degranulation]
GO:0045453 [bone resorption]
GO:0045859 [regulation of protein kinase activity]
GO:0051056 [regulation of small GTPase mediated signal transduction]
GO:0060263 [regulation of respiratory burst]
GO:0060753 [regulation of mast cell chemotaxis]
GO:0070062 [extracellular exosome]
GO:0071593 [lymphocyte aggregation]
GO:0090023 [positive regulation of neutrophil chemotaxis]
GO:1902622 [regulation of neutrophil migration]
GO:1903955 [positive regulation of protein targeting to mitochondrion]
Show all
192 aa
21.4 kDa
No 0
RAC2-002
ENSP00000385666
ENST00000401529
B1AH79 [Direct mapping]
Ras-related C3 botulinum toxin substrate 2; Ras-related C3 botulinum toxin substrate 2 (Rho family, small GTP binding protein Rac2), isoform CRA_d
Show all
Predicted intracellular proteins
RAS pathway related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0007264 [small GTPase mediated signal transduction]
Show all
86 aa
9 kDa
No 0
RAC2-003
ENSP00000403778
ENST00000441619
B1AH78 [Direct mapping]
Ras-related C3 botulinum toxin substrate 2
Show all
Predicted intracellular proteins
RAS pathway related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
Show all
166 aa
18.5 kDa
No 0
RAC2-004
ENSP00000385270
ENST00000406508
B1AH77 [Direct mapping]
Ras-related C3 botulinum toxin substrate 2
Show all
Predicted intracellular proteins
RAS pathway related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
Show all
148 aa
16.8 kDa
No 0
RAC2-007
ENSP00000385590
ENST00000405484
B1AH80 [Direct mapping]
Ras-related C3 botulinum toxin substrate 2; Ras-related C3 botulinum toxin substrate 2 (Rho family, small GTP binding protein Rac2), isoform CRA_c
Show all
Predicted intracellular proteins
RAS pathway related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
Show all
185 aa
20.8 kDa
No 0

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